Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.61□□□□□ -0.23
Tff1Q08423 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Tff1Q08423 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Tff1Q08423 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tff1Q08423 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tff1Q08423 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tff1Q08423 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Tff1Q08423 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tff1Q08423 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Tff1Q08423 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC13.61□□□□□ -0.23
Tff1Q08423 Gm27000-201ENSMUST00000182943 842 ntBASIC13.61□□□□□ -0.23
Tff1Q08423 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.61□□□□□ -0.23
Tff1Q08423 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tff1Q08423 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Tff1Q08423 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tff1Q08423 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Tff1Q08423 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tff1Q08423 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tff1Q08423 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tff1Q08423 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tff1Q08423 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tff1Q08423 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tff1Q08423 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tff1Q08423 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tff1Q08423 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tff1Q08423 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC13.6□□□□□ -0.23
Tff1Q08423 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tff1Q08423 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tff1Q08423 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Tff1Q08423 Gm7712-202ENSMUST00000222331 1510 ntBASIC13.6□□□□□ -0.23
Tff1Q08423 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.6□□□□□ -0.23
Tff1Q08423 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tff1Q08423 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tff1Q08423 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC13.6□□□□□ -0.23
Tff1Q08423 Gm23634-201ENSMUST00000175071 91 ntBASIC13.6□□□□□ -0.23
Tff1Q08423 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tff1Q08423 Gm3375-201ENSMUST00000203929 796 ntBASIC13.6□□□□□ -0.23
Tff1Q08423 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Tff1Q08423 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tff1Q08423 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tff1Q08423 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC13.6□□□□□ -0.23
Tff1Q08423 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tff1Q08423 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tff1Q08423 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC13.6□□□□□ -0.23
Tff1Q08423 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tff1Q08423 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tff1Q08423 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tff1Q08423 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tff1Q08423 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tff1Q08423 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tff1Q08423 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.6□□□□□ -0.23
Tff1Q08423 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Tff1Q08423 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tff1Q08423 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tff1Q08423 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tff1Q08423 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tff1Q08423 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tff1Q08423 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tff1Q08423 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tff1Q08423 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tff1Q08423 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tff1Q08423 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tff1Q08423 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.59□□□□□ -0.23
Tff1Q08423 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tff1Q08423 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tff1Q08423 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tff1Q08423 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.59□□□□□ -0.23
Tff1Q08423 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tff1Q08423 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tff1Q08423 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tff1Q08423 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tff1Q08423 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tff1Q08423 Gm7638-201ENSMUST00000121348 967 ntBASIC13.59□□□□□ -0.23
Tff1Q08423 Gm18959-201ENSMUST00000208954 655 ntBASIC13.59□□□□□ -0.23
Tff1Q08423 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tff1Q08423 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Tff1Q08423 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.59□□□□□ -0.23
Tff1Q08423 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tff1Q08423 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tff1Q08423 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tff1Q08423 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tff1Q08423 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Tff1Q08423 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tff1Q08423 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tff1Q08423 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Tff1Q08423 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Tff1Q08423 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Tff1Q08423 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.58□□□□□ -0.24
Tff1Q08423 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Tff1Q08423 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tff1Q08423 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tff1Q08423 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tff1Q08423 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Tff1Q08423 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tff1Q08423 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tff1Q08423 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tff1Q08423 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tff1Q08423 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Tff1Q08423 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tff1Q08423 Gm10013-201ENSMUST00000106074 672 ntBASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms