Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col8a1Q00780 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col8a1Q00780 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col8a1Q00780 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col8a1Q00780 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col8a1Q00780 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col8a1Q00780 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Col8a1Q00780 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.91□□□□□ -0.18
Col8a1Q00780 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.91□□□□□ -0.18
Col8a1Q00780 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col8a1Q00780 Gm4535-201ENSMUST00000182274 558 ntBASIC13.91□□□□□ -0.18
Col8a1Q00780 Mir8112-201ENSMUST00000184382 131 ntBASIC13.91□□□□□ -0.18
Col8a1Q00780 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col8a1Q00780 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.91□□□□□ -0.18
Col8a1Q00780 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col8a1Q00780 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
Col8a1Q00780 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.91□□□□□ -0.18
Col8a1Q00780 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.91□□□□□ -0.18
Col8a1Q00780 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Col8a1Q00780 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col8a1Q00780 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col8a1Q00780 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col8a1Q00780 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col8a1Q00780 Gm10355-201ENSMUST00000097146 517 ntBASIC13.91□□□□□ -0.18
Col8a1Q00780 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col8a1Q00780 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col8a1Q00780 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC13.91□□□□□ -0.18
Col8a1Q00780 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col8a1Q00780 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col8a1Q00780 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.91□□□□□ -0.18
Col8a1Q00780 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col8a1Q00780 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col8a1Q00780 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col8a1Q00780 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.9□□□□□ -0.18
Col8a1Q00780 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC13.9□□□□□ -0.18
Col8a1Q00780 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col8a1Q00780 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col8a1Q00780 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC13.9□□□□□ -0.18
Col8a1Q00780 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col8a1Q00780 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col8a1Q00780 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col8a1Q00780 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col8a1Q00780 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col8a1Q00780 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.9□□□□□ -0.18
Col8a1Q00780 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col8a1Q00780 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.9□□□□□ -0.18
Col8a1Q00780 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Col8a1Q00780 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col8a1Q00780 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col8a1Q00780 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Col8a1Q00780 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Col8a1Q00780 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col8a1Q00780 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC13.9□□□□□ -0.18
Col8a1Q00780 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col8a1Q00780 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col8a1Q00780 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col8a1Q00780 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col8a1Q00780 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC13.89□□□□□ -0.19
Col8a1Q00780 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col8a1Q00780 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col8a1Q00780 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col8a1Q00780 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
Col8a1Q00780 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.89□□□□□ -0.19
Col8a1Q00780 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.89□□□□□ -0.19
Col8a1Q00780 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col8a1Q00780 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col8a1Q00780 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col8a1Q00780 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col8a1Q00780 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col8a1Q00780 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col8a1Q00780 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col8a1Q00780 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col8a1Q00780 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col8a1Q00780 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col8a1Q00780 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC13.89□□□□□ -0.19
Col8a1Q00780 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col8a1Q00780 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col8a1Q00780 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col8a1Q00780 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col8a1Q00780 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col8a1Q00780 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col8a1Q00780 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col8a1Q00780 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC13.88□□□□□ -0.19
Col8a1Q00780 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col8a1Q00780 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col8a1Q00780 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.88□□□□□ -0.19
Col8a1Q00780 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.88□□□□□ -0.19
Col8a1Q00780 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col8a1Q00780 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.88□□□□□ -0.19
Col8a1Q00780 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Col8a1Q00780 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.88□□□□□ -0.19
Col8a1Q00780 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col8a1Q00780 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col8a1Q00780 Gm6550-201ENSMUST00000187574 993 ntBASIC13.88□□□□□ -0.19
Col8a1Q00780 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Col8a1Q00780 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.88□□□□□ -0.19
Col8a1Q00780 AV026068-213ENSMUST00000223675 1171 ntBASIC13.88□□□□□ -0.19
Col8a1Q00780 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col8a1Q00780 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col8a1Q00780 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms