Protein–RNA interactions for Protein: P97929

Brca2, Breast cancer type 2 susceptibility protein homolog, mousemouse

Predictions only

Length 3,329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca2P97929 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Brca2P97929 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Brca2P97929 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.69■□□□□ 0.1
Brca2P97929 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Brca2P97929 Gm13597-201ENSMUST00000121239 375 ntBASIC15.69■□□□□ 0.1
Brca2P97929 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Brca2P97929 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Brca2P97929 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Brca2P97929 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.69■□□□□ 0.1
Brca2P97929 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Brca2P97929 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Brca2P97929 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Brca2P97929 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Brca2P97929 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.68■□□□□ 0.1
Brca2P97929 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Brca2P97929 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Brca2P97929 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Brca2P97929 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Brca2P97929 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Brca2P97929 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.68■□□□□ 0.1
Brca2P97929 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.68■□□□□ 0.1
Brca2P97929 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Brca2P97929 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.68■□□□□ 0.1
Brca2P97929 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Brca2P97929 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Brca2P97929 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Brca2P97929 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Brca2P97929 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Brca2P97929 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Brca2P97929 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.67■□□□□ 0.1
Brca2P97929 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Brca2P97929 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Brca2P97929 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Brca2P97929 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Brca2P97929 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Brca2P97929 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC15.67■□□□□ 0.1
Brca2P97929 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.67■□□□□ 0.1
Brca2P97929 Gm27494-201ENSMUST00000184735 189 ntBASIC15.67■□□□□ 0.1
Brca2P97929 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Brca2P97929 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.67■□□□□ 0.1
Brca2P97929 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Brca2P97929 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Brca2P97929 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Brca2P97929 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Brca2P97929 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Brca2P97929 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Brca2P97929 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Brca2P97929 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Brca2P97929 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Brca2P97929 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Brca2P97929 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Brca2P97929 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Brca2P97929 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Brca2P97929 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Brca2P97929 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.66■□□□□ 0.1
Brca2P97929 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Brca2P97929 Gm13823-201ENSMUST00000119930 345 ntBASIC15.66■□□□□ 0.1
Brca2P97929 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Brca2P97929 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Brca2P97929 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.66■□□□□ 0.1
Brca2P97929 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Brca2P97929 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Brca2P97929 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Brca2P97929 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Brca2P97929 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Brca2P97929 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Brca2P97929 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.66■□□□□ 0.1
Brca2P97929 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.66■□□□□ 0.1
Brca2P97929 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.66■□□□□ 0.1
Brca2P97929 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Brca2P97929 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Brca2P97929 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Brca2P97929 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Brca2P97929 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.65■□□□□ 0.1
Brca2P97929 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Brca2P97929 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Brca2P97929 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Brca2P97929 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Brca2P97929 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Brca2P97929 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Brca2P97929 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Brca2P97929 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Brca2P97929 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Brca2P97929 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Brca2P97929 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Brca2P97929 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Brca2P97929 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.65■□□□□ 0.1
Brca2P97929 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Brca2P97929 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Brca2P97929 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Brca2P97929 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.65■□□□□ 0.1
Brca2P97929 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Brca2P97929 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Brca2P97929 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Brca2P97929 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Brca2P97929 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Brca2P97929 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.65■□□□□ 0.1
Brca2P97929 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC15.65■□□□□ 0.1
Brca2P97929 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Brca2P97929 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms