Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Npas1P97459 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Npas1P97459 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Npas1P97459 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Npas1P97459 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Npas1P97459 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Npas1P97459 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Npas1P97459 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Npas1P97459 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Npas1P97459 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Npas1P97459 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Npas1P97459 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Npas1P97459 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Npas1P97459 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Npas1P97459 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Npas1P97459 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Npas1P97459 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
Npas1P97459 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Npas1P97459 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Npas1P97459 Gm11643-201ENSMUST00000119578 864 ntBASIC13.74□□□□□ -0.21
Npas1P97459 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC13.74□□□□□ -0.21
Npas1P97459 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC13.74□□□□□ -0.21
Npas1P97459 Gm44672-201ENSMUST00000206944 1098 ntBASIC13.74□□□□□ -0.21
Npas1P97459 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Npas1P97459 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Npas1P97459 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC13.74□□□□□ -0.21
Npas1P97459 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Npas1P97459 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Npas1P97459 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Npas1P97459 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Npas1P97459 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Npas1P97459 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Npas1P97459 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Npas1P97459 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Npas1P97459 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Npas1P97459 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.74□□□□□ -0.21
Npas1P97459 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Npas1P97459 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Npas1P97459 Gm45560-201ENSMUST00000211492 1472 ntBASIC13.74□□□□□ -0.21
Npas1P97459 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Npas1P97459 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Npas1P97459 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Npas1P97459 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC13.73□□□□□ -0.21
Npas1P97459 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Npas1P97459 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Npas1P97459 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Npas1P97459 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Npas1P97459 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Npas1P97459 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Npas1P97459 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Npas1P97459 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Npas1P97459 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Npas1P97459 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Npas1P97459 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Npas1P97459 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Npas1P97459 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Npas1P97459 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC13.73□□□□□ -0.21
Npas1P97459 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC13.73□□□□□ -0.21
Npas1P97459 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Npas1P97459 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Npas1P97459 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Npas1P97459 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Npas1P97459 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Npas1P97459 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Npas1P97459 Asic1-205ENSMUST00000228185 1818 ntBASIC13.73□□□□□ -0.21
Npas1P97459 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Npas1P97459 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Npas1P97459 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Npas1P97459 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Npas1P97459 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Npas1P97459 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Npas1P97459 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC13.72□□□□□ -0.21
Npas1P97459 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Npas1P97459 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Npas1P97459 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Npas1P97459 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.72□□□□□ -0.21
Npas1P97459 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Npas1P97459 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Npas1P97459 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Npas1P97459 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Npas1P97459 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Npas1P97459 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Npas1P97459 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Npas1P97459 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC13.72□□□□□ -0.21
Npas1P97459 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Npas1P97459 Mir6349-201ENSMUST00000184059 97 ntBASIC13.72□□□□□ -0.21
Npas1P97459 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Npas1P97459 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Npas1P97459 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Npas1P97459 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Npas1P97459 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Npas1P97459 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Npas1P97459 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.72□□□□□ -0.21
Npas1P97459 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Npas1P97459 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Npas1P97459 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Npas1P97459 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Npas1P97459 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Npas1P97459 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Npas1P97459 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms