Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm27702-201ENSMUST00000184512 56 ntBASIC20.51■□□□□ 0.87
Nkx2-3P97334 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nkx2-3P97334 CT943659.1-201ENSMUST00000215459 326 ntBASIC20.51■□□□□ 0.87
Nkx2-3P97334 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nkx2-3P97334 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nkx2-3P97334 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nkx2-3P97334 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nkx2-3P97334 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Nkx2-3P97334 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nkx2-3P97334 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nkx2-3P97334 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nkx2-3P97334 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nkx2-3P97334 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Nkx2-3P97334 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Nkx2-3P97334 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nkx2-3P97334 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nkx2-3P97334 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nkx2-3P97334 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nkx2-3P97334 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
Nkx2-3P97334 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nkx2-3P97334 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nkx2-3P97334 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Nkx2-3P97334 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Nkx2-3P97334 Gm23935-201ENSMUST00000102303 57 ntBASIC20.5■□□□□ 0.87
Nkx2-3P97334 Gm24270-201ENSMUST00000102326 57 ntBASIC20.5■□□□□ 0.87
Nkx2-3P97334 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC20.5■□□□□ 0.87
Nkx2-3P97334 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Nkx2-3P97334 Gm24245-201ENSMUST00000157318 57 ntBASIC20.5■□□□□ 0.87
Nkx2-3P97334 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC20.5■□□□□ 0.87
Nkx2-3P97334 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC20.5■□□□□ 0.87
Nkx2-3P97334 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC20.5■□□□□ 0.87
Nkx2-3P97334 Gm10175-201ENSMUST00000086013 645 ntBASIC20.5■□□□□ 0.87
Nkx2-3P97334 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nkx2-3P97334 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nkx2-3P97334 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nkx2-3P97334 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Nkx2-3P97334 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nkx2-3P97334 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nkx2-3P97334 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nkx2-3P97334 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nkx2-3P97334 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nkx2-3P97334 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nkx2-3P97334 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nkx2-3P97334 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC20.49■□□□□ 0.87
Nkx2-3P97334 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC20.49■□□□□ 0.87
Nkx2-3P97334 AC090659.1-201ENSMUST00000224334 768 ntBASIC20.49■□□□□ 0.87
Nkx2-3P97334 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Nkx2-3P97334 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nkx2-3P97334 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nkx2-3P97334 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nkx2-3P97334 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nkx2-3P97334 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
Nkx2-3P97334 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.49■□□□□ 0.87
Nkx2-3P97334 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nkx2-3P97334 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nkx2-3P97334 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC20.48■□□□□ 0.87
Nkx2-3P97334 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC20.48■□□□□ 0.87
Nkx2-3P97334 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Nkx2-3P97334 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Nkx2-3P97334 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nkx2-3P97334 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nkx2-3P97334 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nkx2-3P97334 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Nkx2-3P97334 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nkx2-3P97334 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nkx2-3P97334 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nkx2-3P97334 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nkx2-3P97334 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nkx2-3P97334 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Nkx2-3P97334 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nkx2-3P97334 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nkx2-3P97334 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nkx2-3P97334 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nkx2-3P97334 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nkx2-3P97334 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Nkx2-3P97334 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Nkx2-3P97334 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Nkx2-3P97334 AC117588.1-201ENSMUST00000228510 999 ntBASIC20.47■□□□□ 0.87
Nkx2-3P97334 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nkx2-3P97334 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nkx2-3P97334 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Nkx2-3P97334 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC20.47■□□□□ 0.87
Nkx2-3P97334 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nkx2-3P97334 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC20.47■□□□□ 0.87
Nkx2-3P97334 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Nkx2-3P97334 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
Nkx2-3P97334 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nkx2-3P97334 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nkx2-3P97334 Gm8839-201ENSMUST00000121279 1645 ntBASIC20.46■□□□□ 0.87
Nkx2-3P97334 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nkx2-3P97334 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Nkx2-3P97334 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nkx2-3P97334 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Nkx2-3P97334 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nkx2-3P97334 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
Nkx2-3P97334 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC20.46■□□□□ 0.87
Nkx2-3P97334 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC20.46■□□□□ 0.87
Nkx2-3P97334 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC20.46■□□□□ 0.87
Nkx2-3P97334 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Nkx2-3P97334 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms