Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43cP86449 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43cP86449 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43cP86449 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43cP86449 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43cP86449 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim43cP86449 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim43cP86449 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trim43cP86449 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trim43cP86449 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim43cP86449 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim43cP86449 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim43cP86449 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim43cP86449 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.77■□□□□ 0.44
Trim43cP86449 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.77■□□□□ 0.44
Trim43cP86449 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
Trim43cP86449 Gm17808-201ENSMUST00000200859 894 ntBASIC17.77■□□□□ 0.44
Trim43cP86449 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trim43cP86449 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.77■□□□□ 0.44
Trim43cP86449 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim43cP86449 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim43cP86449 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim43cP86449 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim43cP86449 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim43cP86449 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.77■□□□□ 0.44
Trim43cP86449 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Trim43cP86449 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim43cP86449 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim43cP86449 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Trim43cP86449 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim43cP86449 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim43cP86449 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.77■□□□□ 0.43
Trim43cP86449 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim43cP86449 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim43cP86449 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim43cP86449 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim43cP86449 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim43cP86449 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Trim43cP86449 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.76■□□□□ 0.43
Trim43cP86449 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim43cP86449 AA414768-201ENSMUST00000121924 1257 ntBASIC17.76■□□□□ 0.43
Trim43cP86449 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim43cP86449 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.76■□□□□ 0.43
Trim43cP86449 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Trim43cP86449 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim43cP86449 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim43cP86449 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim43cP86449 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim43cP86449 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim43cP86449 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Trim43cP86449 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim43cP86449 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim43cP86449 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trim43cP86449 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Trim43cP86449 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim43cP86449 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim43cP86449 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim43cP86449 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim43cP86449 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim43cP86449 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim43cP86449 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim43cP86449 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim43cP86449 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Trim43cP86449 Gm11950-201ENSMUST00000121615 838 ntBASIC17.75■□□□□ 0.43
Trim43cP86449 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.75■□□□□ 0.43
Trim43cP86449 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.75■□□□□ 0.43
Trim43cP86449 Gm6623-201ENSMUST00000173570 544 ntBASIC17.75■□□□□ 0.43
Trim43cP86449 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.75■□□□□ 0.43
Trim43cP86449 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim43cP86449 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim43cP86449 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim43cP86449 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim43cP86449 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.75■□□□□ 0.43
Trim43cP86449 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Trim43cP86449 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim43cP86449 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.74■□□□□ 0.43
Trim43cP86449 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim43cP86449 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim43cP86449 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim43cP86449 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim43cP86449 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trim43cP86449 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim43cP86449 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim43cP86449 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Trim43cP86449 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.74■□□□□ 0.43
Trim43cP86449 Gm44430-201ENSMUST00000203376 995 ntBASIC17.74■□□□□ 0.43
Trim43cP86449 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim43cP86449 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim43cP86449 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim43cP86449 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Trim43cP86449 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim43cP86449 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim43cP86449 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim43cP86449 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.74■□□□□ 0.43
Trim43cP86449 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim43cP86449 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim43cP86449 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim43cP86449 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim43cP86449 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim43cP86449 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms