Protein–RNA interactions for Protein: P84228

Hist1h3b, Histone H3.2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3bP84228 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hist1h3bP84228 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Hist1h3bP84228 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Hist1h3bP84228 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hist1h3bP84228 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.36□□□□□ -0.11
Hist1h3bP84228 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hist1h3bP84228 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hist1h3bP84228 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Hist1h3bP84228 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hist1h3bP84228 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hist1h3bP84228 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Hist1h3bP84228 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist1h3bP84228 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist1h3bP84228 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist1h3bP84228 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Hist1h3bP84228 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Hist1h3bP84228 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist1h3bP84228 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist1h3bP84228 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Hist1h3bP84228 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Hist1h3bP84228 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist1h3bP84228 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
Hist1h3bP84228 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist1h3bP84228 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hist1h3bP84228 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hist1h3bP84228 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist1h3bP84228 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Hist1h3bP84228 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist1h3bP84228 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hist1h3bP84228 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist1h3bP84228 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist1h3bP84228 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hist1h3bP84228 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hist1h3bP84228 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hist1h3bP84228 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hist1h3bP84228 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hist1h3bP84228 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hist1h3bP84228 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hist1h3bP84228 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hist1h3bP84228 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hist1h3bP84228 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hist1h3bP84228 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hist1h3bP84228 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hist1h3bP84228 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.34□□□□□ -0.11
Hist1h3bP84228 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hist1h3bP84228 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hist1h3bP84228 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Hist1h3bP84228 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hist1h3bP84228 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Hist1h3bP84228 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hist1h3bP84228 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hist1h3bP84228 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hist1h3bP84228 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hist1h3bP84228 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hist1h3bP84228 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hist1h3bP84228 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hist1h3bP84228 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hist1h3bP84228 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hist1h3bP84228 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Hist1h3bP84228 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Hist1h3bP84228 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Hist1h3bP84228 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.33□□□□□ -0.11
Hist1h3bP84228 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hist1h3bP84228 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hist1h3bP84228 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hist1h3bP84228 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hist1h3bP84228 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hist1h3bP84228 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Hist1h3bP84228 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hist1h3bP84228 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Hist1h3bP84228 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hist1h3bP84228 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hist1h3bP84228 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Hist1h3bP84228 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.33□□□□□ -0.12
Hist1h3bP84228 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hist1h3bP84228 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hist1h3bP84228 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.33□□□□□ -0.12
Hist1h3bP84228 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hist1h3bP84228 Gm18032-201ENSMUST00000222541 538 ntBASIC14.33□□□□□ -0.12
Hist1h3bP84228 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hist1h3bP84228 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hist1h3bP84228 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.33□□□□□ -0.12
Hist1h3bP84228 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hist1h3bP84228 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hist1h3bP84228 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hist1h3bP84228 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.33□□□□□ -0.12
Hist1h3bP84228 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hist1h3bP84228 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.33□□□□□ -0.12
Hist1h3bP84228 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hist1h3bP84228 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hist1h3bP84228 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hist1h3bP84228 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hist1h3bP84228 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hist1h3bP84228 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hist1h3bP84228 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.32□□□□□ -0.12
Hist1h3bP84228 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hist1h3bP84228 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Hist1h3bP84228 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hist1h3bP84228 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.32□□□□□ -0.12
Hist1h3bP84228 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms