Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Six5P70178 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Six5P70178 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
Six5P70178 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Six5P70178 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Six5P70178 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.28■□□□□ 0.04
Six5P70178 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Six5P70178 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Six5P70178 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Six5P70178 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.28■□□□□ 0.04
Six5P70178 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Six5P70178 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Six5P70178 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Six5P70178 Mir770-201ENSMUST00000103252 94 ntBASIC15.28■□□□□ 0.04
Six5P70178 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Six5P70178 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Six5P70178 AA414768-201ENSMUST00000121924 1257 ntBASIC15.28■□□□□ 0.04
Six5P70178 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Six5P70178 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Six5P70178 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.28■□□□□ 0.04
Six5P70178 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Six5P70178 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.28■□□□□ 0.04
Six5P70178 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Six5P70178 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Six5P70178 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Six5P70178 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Six5P70178 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.28■□□□□ 0.04
Six5P70178 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.28■□□□□ 0.04
Six5P70178 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Six5P70178 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.28■□□□□ 0.04
Six5P70178 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Six5P70178 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Six5P70178 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Six5P70178 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Six5P70178 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Six5P70178 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Six5P70178 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Six5P70178 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Six5P70178 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Six5P70178 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Six5P70178 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Six5P70178 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Six5P70178 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Six5P70178 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Six5P70178 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Six5P70178 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Six5P70178 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.27■□□□□ 0.04
Six5P70178 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Six5P70178 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Six5P70178 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Six5P70178 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.27■□□□□ 0.04
Six5P70178 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Six5P70178 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.27■□□□□ 0.03
Six5P70178 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Six5P70178 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Six5P70178 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.27■□□□□ 0.03
Six5P70178 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Six5P70178 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Six5P70178 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Six5P70178 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.26■□□□□ 0.03
Six5P70178 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.26■□□□□ 0.03
Six5P70178 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Six5P70178 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Six5P70178 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Six5P70178 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Six5P70178 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Six5P70178 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Six5P70178 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Six5P70178 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Six5P70178 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Six5P70178 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Six5P70178 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.26■□□□□ 0.03
Six5P70178 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.26■□□□□ 0.03
Six5P70178 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.26■□□□□ 0.03
Six5P70178 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Six5P70178 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Six5P70178 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Six5P70178 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Six5P70178 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Six5P70178 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Six5P70178 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Six5P70178 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Six5P70178 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Six5P70178 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Six5P70178 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Six5P70178 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Six5P70178 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Six5P70178 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Six5P70178 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Six5P70178 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Six5P70178 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Six5P70178 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Six5P70178 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Six5P70178 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Six5P70178 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Six5P70178 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Six5P70178 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.25■□□□□ 0.03
Six5P70178 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Six5P70178 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.25■□□□□ 0.03
Six5P70178 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms