Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgb1P63158 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgb1P63158 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgb1P63158 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgb1P63158 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgb1P63158 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgb1P63158 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Hmgb1P63158 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Hmgb1P63158 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Hmgb1P63158 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgb1P63158 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgb1P63158 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.96■□□□□ 0.47
Hmgb1P63158 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgb1P63158 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgb1P63158 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgb1P63158 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgb1P63158 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgb1P63158 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgb1P63158 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.96■□□□□ 0.47
Hmgb1P63158 Gm18421-201ENSMUST00000204122 625 ntBASIC17.96■□□□□ 0.47
Hmgb1P63158 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Hmgb1P63158 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.96■□□□□ 0.47
Hmgb1P63158 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgb1P63158 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgb1P63158 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.96■□□□□ 0.47
Hmgb1P63158 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Hmgb1P63158 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgb1P63158 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgb1P63158 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.96■□□□□ 0.47
Hmgb1P63158 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgb1P63158 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgb1P63158 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Hmgb1P63158 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgb1P63158 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgb1P63158 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgb1P63158 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgb1P63158 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgb1P63158 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgb1P63158 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.95■□□□□ 0.46
Hmgb1P63158 Gm13436-201ENSMUST00000120418 567 ntBASIC17.95■□□□□ 0.46
Hmgb1P63158 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.95■□□□□ 0.46
Hmgb1P63158 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgb1P63158 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgb1P63158 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgb1P63158 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgb1P63158 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgb1P63158 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgb1P63158 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgb1P63158 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgb1P63158 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
Hmgb1P63158 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgb1P63158 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgb1P63158 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgb1P63158 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgb1P63158 Gm11336-201ENSMUST00000118168 334 ntBASIC17.94■□□□□ 0.46
Hmgb1P63158 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgb1P63158 Gm29707-201ENSMUST00000196325 491 ntBASIC17.94■□□□□ 0.46
Hmgb1P63158 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.94■□□□□ 0.46
Hmgb1P63158 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Hmgb1P63158 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.94■□□□□ 0.46
Hmgb1P63158 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgb1P63158 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgb1P63158 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgb1P63158 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgb1P63158 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgb1P63158 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgb1P63158 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgb1P63158 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgb1P63158 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Hmgb1P63158 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmgb1P63158 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmgb1P63158 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmgb1P63158 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Hmgb1P63158 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmgb1P63158 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.93■□□□□ 0.46
Hmgb1P63158 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmgb1P63158 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmgb1P63158 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.93■□□□□ 0.46
Hmgb1P63158 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.93■□□□□ 0.46
Hmgb1P63158 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmgb1P63158 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmgb1P63158 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.93■□□□□ 0.46
Hmgb1P63158 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hmgb1P63158 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmgb1P63158 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.93■□□□□ 0.46
Hmgb1P63158 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmgb1P63158 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hmgb1P63158 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.93■□□□□ 0.46
Hmgb1P63158 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmgb1P63158 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hmgb1P63158 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hmgb1P63158 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Hmgb1P63158 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgb1P63158 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgb1P63158 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Hmgb1P63158 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgb1P63158 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.92■□□□□ 0.46
Hmgb1P63158 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.92■□□□□ 0.46
Hmgb1P63158 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgb1P63158 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms