Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rps28P62858 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC9.73□□□□□ -0.85
Rps28P62858 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rps28P62858 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rps28P62858 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rps28P62858 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
Rps28P62858 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rps28P62858 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rps28P62858 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rps28P62858 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rps28P62858 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rps28P62858 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rps28P62858 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC9.73□□□□□ -0.85
Rps28P62858 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Rps28P62858 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rps28P62858 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rps28P62858 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Rps28P62858 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rps28P62858 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rps28P62858 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rps28P62858 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Rps28P62858 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rps28P62858 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rps28P62858 Gm38094-201ENSMUST00000195864 2978 ntBASIC9.73□□□□□ -0.85
Rps28P62858 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rps28P62858 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rps28P62858 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Rps28P62858 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rps28P62858 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rps28P62858 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Rps28P62858 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Rps28P62858 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rps28P62858 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Rps28P62858 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rps28P62858 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rps28P62858 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rps28P62858 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Rps28P62858 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rps28P62858 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rps28P62858 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rps28P62858 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rps28P62858 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC9.72□□□□□ -0.85
Rps28P62858 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rps28P62858 Gm37437-201ENSMUST00000194451 1937 ntBASIC9.72□□□□□ -0.85
Rps28P62858 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Rps28P62858 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rps28P62858 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC9.72□□□□□ -0.85
Rps28P62858 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rps28P62858 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rps28P62858 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Rps28P62858 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Rps28P62858 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rps28P62858 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rps28P62858 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC9.72□□□□□ -0.85
Rps28P62858 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rps28P62858 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rps28P62858 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rps28P62858 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC9.72□□□□□ -0.85
Rps28P62858 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rps28P62858 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC9.72□□□□□ -0.85
Rps28P62858 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Rps28P62858 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rps28P62858 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rps28P62858 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rps28P62858 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rps28P62858 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rps28P62858 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rps28P62858 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC9.72□□□□□ -0.85
Rps28P62858 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rps28P62858 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Rps28P62858 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC9.72□□□□□ -0.85
Rps28P62858 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Rps28P62858 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.85
Rps28P62858 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC9.71□□□□□ -0.85
Rps28P62858 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Rps28P62858 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Rps28P62858 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Rps28P62858 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC9.71□□□□□ -0.85
Rps28P62858 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Rps28P62858 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Rps28P62858 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Rps28P62858 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Rps28P62858 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC9.71□□□□□ -0.85
Rps28P62858 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Rps28P62858 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Rps28P62858 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Rps28P62858 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC9.71□□□□□ -0.85
Rps28P62858 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC9.71□□□□□ -0.85
Rps28P62858 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC9.71□□□□□ -0.85
Rps28P62858 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Rps28P62858 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Rps28P62858 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Rps28P62858 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Rps28P62858 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Rps28P62858 Gm9856-201ENSMUST00000217077 2578 ntBASIC9.71□□□□□ -0.86
Rps28P62858 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Rps28P62858 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Rps28P62858 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Rps28P62858 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Rps28P62858 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms