Protein–RNA interactions for Protein: P62069

Usp46, Ubiquitin carboxyl-terminal hydrolase 46, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp46P62069 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp46P62069 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Usp46P62069 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Usp46P62069 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp46P62069 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.06■□□□□ 0.32
Usp46P62069 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp46P62069 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Usp46P62069 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Usp46P62069 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp46P62069 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Usp46P62069 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp46P62069 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp46P62069 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp46P62069 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp46P62069 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp46P62069 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp46P62069 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp46P62069 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp46P62069 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp46P62069 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp46P62069 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usp46P62069 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp46P62069 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp46P62069 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Usp46P62069 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp46P62069 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usp46P62069 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usp46P62069 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.05■□□□□ 0.32
Usp46P62069 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp46P62069 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp46P62069 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
Usp46P62069 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp46P62069 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.05■□□□□ 0.32
Usp46P62069 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp46P62069 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp46P62069 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usp46P62069 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp46P62069 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.04■□□□□ 0.32
Usp46P62069 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp46P62069 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp46P62069 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp46P62069 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp46P62069 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp46P62069 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp46P62069 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp46P62069 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Usp46P62069 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp46P62069 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp46P62069 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp46P62069 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp46P62069 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Usp46P62069 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.04■□□□□ 0.32
Usp46P62069 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp46P62069 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.04■□□□□ 0.32
Usp46P62069 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp46P62069 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp46P62069 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp46P62069 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp46P62069 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp46P62069 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp46P62069 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.04■□□□□ 0.32
Usp46P62069 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp46P62069 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Usp46P62069 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp46P62069 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Usp46P62069 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp46P62069 Gm13312-201ENSMUST00000119631 718 ntBASIC17.03■□□□□ 0.32
Usp46P62069 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.03■□□□□ 0.32
Usp46P62069 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp46P62069 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp46P62069 Birc2-201ENSMUST00000054878 378 ntBASIC17.03■□□□□ 0.32
Usp46P62069 Gm7461-201ENSMUST00000058918 827 ntBASIC17.03■□□□□ 0.32
Usp46P62069 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp46P62069 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp46P62069 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Usp46P62069 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp46P62069 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp46P62069 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.03■□□□□ 0.32
Usp46P62069 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Usp46P62069 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp46P62069 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Usp46P62069 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp46P62069 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Usp46P62069 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp46P62069 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Usp46P62069 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp46P62069 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp46P62069 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp46P62069 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp46P62069 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.02■□□□□ 0.32
Usp46P62069 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Usp46P62069 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp46P62069 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Usp46P62069 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.02■□□□□ 0.32
Usp46P62069 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.02■□□□□ 0.32
Usp46P62069 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.02■□□□□ 0.32
Usp46P62069 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp46P62069 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Usp46P62069 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Usp46P62069 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms