Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sec61a1P61620 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.42□□□□□ -0.1
Sec61a1P61620 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sec61a1P61620 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Sec61a1P61620 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sec61a1P61620 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.42□□□□□ -0.1
Sec61a1P61620 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Sec61a1P61620 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sec61a1P61620 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Sec61a1P61620 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.42□□□□□ -0.1
Sec61a1P61620 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sec61a1P61620 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.42□□□□□ -0.1
Sec61a1P61620 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.42□□□□□ -0.1
Sec61a1P61620 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sec61a1P61620 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.42□□□□□ -0.1
Sec61a1P61620 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sec61a1P61620 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.42□□□□□ -0.1
Sec61a1P61620 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sec61a1P61620 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sec61a1P61620 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sec61a1P61620 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Sec61a1P61620 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sec61a1P61620 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sec61a1P61620 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sec61a1P61620 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Sec61a1P61620 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sec61a1P61620 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sec61a1P61620 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sec61a1P61620 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sec61a1P61620 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Sec61a1P61620 Gm6433-201ENSMUST00000118634 875 ntBASIC14.41□□□□□ -0.1
Sec61a1P61620 Gm13559-201ENSMUST00000120476 863 ntBASIC14.41□□□□□ -0.1
Sec61a1P61620 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.41□□□□□ -0.1
Sec61a1P61620 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sec61a1P61620 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sec61a1P61620 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sec61a1P61620 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sec61a1P61620 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sec61a1P61620 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sec61a1P61620 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sec61a1P61620 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sec61a1P61620 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sec61a1P61620 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sec61a1P61620 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.41□□□□□ -0.1
Sec61a1P61620 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Sec61a1P61620 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Sec61a1P61620 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.41□□□□□ -0.1
Sec61a1P61620 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.41□□□□□ -0.1
Sec61a1P61620 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Sec61a1P61620 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.41□□□□□ -0.1
Sec61a1P61620 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Sec61a1P61620 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sec61a1P61620 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sec61a1P61620 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.4□□□□□ -0.1
Sec61a1P61620 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sec61a1P61620 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sec61a1P61620 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sec61a1P61620 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sec61a1P61620 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sec61a1P61620 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sec61a1P61620 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Sec61a1P61620 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sec61a1P61620 Gm7889-201ENSMUST00000185591 958 ntBASIC14.4□□□□□ -0.1
Sec61a1P61620 Gm38027-201ENSMUST00000192315 235 ntBASIC14.4□□□□□ -0.1
Sec61a1P61620 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sec61a1P61620 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Sec61a1P61620 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sec61a1P61620 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sec61a1P61620 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sec61a1P61620 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sec61a1P61620 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sec61a1P61620 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.4□□□□□ -0.1
Sec61a1P61620 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sec61a1P61620 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Sec61a1P61620 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sec61a1P61620 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sec61a1P61620 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sec61a1P61620 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sec61a1P61620 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sec61a1P61620 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Sec61a1P61620 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sec61a1P61620 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sec61a1P61620 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sec61a1P61620 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sec61a1P61620 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sec61a1P61620 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sec61a1P61620 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sec61a1P61620 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Sec61a1P61620 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sec61a1P61620 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sec61a1P61620 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Sec61a1P61620 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sec61a1P61620 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.39□□□□□ -0.11
Sec61a1P61620 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sec61a1P61620 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.39□□□□□ -0.11
Sec61a1P61620 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sec61a1P61620 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sec61a1P61620 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Sec61a1P61620 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sec61a1P61620 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms