Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Sf3b6P59708 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Sf3b6P59708 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sf3b6P59708 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sf3b6P59708 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sf3b6P59708 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sf3b6P59708 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sf3b6P59708 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sf3b6P59708 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Sf3b6P59708 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sf3b6P59708 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Sf3b6P59708 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Sf3b6P59708 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Sf3b6P59708 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Sf3b6P59708 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.52□□□□□ -0.09
Sf3b6P59708 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3b6P59708 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
Sf3b6P59708 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3b6P59708 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3b6P59708 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3b6P59708 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.51□□□□□ -0.09
Sf3b6P59708 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.51□□□□□ -0.09
Sf3b6P59708 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3b6P59708 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.51□□□□□ -0.09
Sf3b6P59708 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.51□□□□□ -0.09
Sf3b6P59708 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3b6P59708 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3b6P59708 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3b6P59708 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3b6P59708 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3b6P59708 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3b6P59708 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Sf3b6P59708 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3b6P59708 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Sf3b6P59708 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3b6P59708 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Sf3b6P59708 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Sf3b6P59708 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.5□□□□□ -0.09
Sf3b6P59708 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Sf3b6P59708 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sf3b6P59708 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Sf3b6P59708 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.5□□□□□ -0.09
Sf3b6P59708 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sf3b6P59708 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sf3b6P59708 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sf3b6P59708 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sf3b6P59708 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sf3b6P59708 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sf3b6P59708 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC14.5□□□□□ -0.09
Sf3b6P59708 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.5□□□□□ -0.09
Sf3b6P59708 Gm9731-201ENSMUST00000209480 747 ntBASIC14.5□□□□□ -0.09
Sf3b6P59708 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.5□□□□□ -0.09
Sf3b6P59708 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sf3b6P59708 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sf3b6P59708 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sf3b6P59708 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Sf3b6P59708 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Sf3b6P59708 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sf3b6P59708 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Sf3b6P59708 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sf3b6P59708 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sf3b6P59708 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sf3b6P59708 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Sf3b6P59708 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sf3b6P59708 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sf3b6P59708 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sf3b6P59708 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sf3b6P59708 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sf3b6P59708 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Sf3b6P59708 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sf3b6P59708 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Sf3b6P59708 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sf3b6P59708 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sf3b6P59708 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sf3b6P59708 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sf3b6P59708 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.49□□□□□ -0.09
Sf3b6P59708 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sf3b6P59708 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sf3b6P59708 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sf3b6P59708 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sf3b6P59708 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sf3b6P59708 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sf3b6P59708 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sf3b6P59708 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sf3b6P59708 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sf3b6P59708 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.49□□□□□ -0.09
Sf3b6P59708 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sf3b6P59708 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sf3b6P59708 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sf3b6P59708 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.48□□□□□ -0.09
Sf3b6P59708 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.48□□□□□ -0.09
Sf3b6P59708 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sf3b6P59708 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Sf3b6P59708 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sf3b6P59708 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sf3b6P59708 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sf3b6P59708 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Sf3b6P59708 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sf3b6P59708 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sf3b6P59708 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms