Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Gm12441-201ENSMUST00000121806 588 ntBASIC13.24□□□□□ -0.29
Sssca1P56873 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sssca1P56873 AC120002.2-201ENSMUST00000220205 773 ntBASIC13.24□□□□□ -0.29
Sssca1P56873 AC164629.5-201ENSMUST00000220387 632 ntBASIC13.24□□□□□ -0.29
Sssca1P56873 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sssca1P56873 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sssca1P56873 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sssca1P56873 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sssca1P56873 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sssca1P56873 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sssca1P56873 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.24□□□□□ -0.29
Sssca1P56873 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sssca1P56873 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sssca1P56873 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sssca1P56873 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sssca1P56873 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sssca1P56873 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Sssca1P56873 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sssca1P56873 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sssca1P56873 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sssca1P56873 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Sssca1P56873 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sssca1P56873 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sssca1P56873 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sssca1P56873 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sssca1P56873 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sssca1P56873 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Sssca1P56873 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sssca1P56873 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Sssca1P56873 Gm12085-201ENSMUST00000119263 940 ntBASIC13.23□□□□□ -0.29
Sssca1P56873 Gm15378-201ENSMUST00000121894 207 ntBASIC13.23□□□□□ -0.29
Sssca1P56873 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sssca1P56873 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC13.23□□□□□ -0.29
Sssca1P56873 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sssca1P56873 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sssca1P56873 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sssca1P56873 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Sssca1P56873 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sssca1P56873 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sssca1P56873 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Sssca1P56873 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Sssca1P56873 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sssca1P56873 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Sssca1P56873 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Sssca1P56873 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sssca1P56873 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sssca1P56873 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sssca1P56873 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Sssca1P56873 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sssca1P56873 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sssca1P56873 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.22□□□□□ -0.29
Sssca1P56873 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sssca1P56873 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sssca1P56873 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Sssca1P56873 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.22□□□□□ -0.29
Sssca1P56873 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.22□□□□□ -0.29
Sssca1P56873 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sssca1P56873 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Sssca1P56873 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Sssca1P56873 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC13.22□□□□□ -0.29
Sssca1P56873 Il3ra-202ENSMUST00000223589 738 ntBASIC13.22□□□□□ -0.29
Sssca1P56873 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sssca1P56873 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sssca1P56873 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sssca1P56873 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sssca1P56873 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sssca1P56873 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sssca1P56873 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sssca1P56873 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sssca1P56873 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sssca1P56873 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sssca1P56873 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sssca1P56873 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sssca1P56873 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sssca1P56873 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13.21□□□□□ -0.29
Sssca1P56873 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sssca1P56873 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sssca1P56873 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sssca1P56873 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.21□□□□□ -0.29
Sssca1P56873 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sssca1P56873 Gm37856-201ENSMUST00000191634 999 ntBASIC13.21□□□□□ -0.29
Sssca1P56873 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sssca1P56873 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sssca1P56873 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sssca1P56873 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sssca1P56873 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sssca1P56873 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sssca1P56873 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sssca1P56873 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sssca1P56873 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sssca1P56873 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Sssca1P56873 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Sssca1P56873 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sssca1P56873 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sssca1P56873 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sssca1P56873 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Sssca1P56873 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Sssca1P56873 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Sssca1P56873 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sssca1P56873 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms