Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.61■□□□□ 0.09
Sox3P53784 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.61■□□□□ 0.09
Sox3P53784 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox3P53784 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox3P53784 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sox3P53784 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox3P53784 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox3P53784 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Sox3P53784 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox3P53784 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox3P53784 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Sox3P53784 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox3P53784 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox3P53784 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sox3P53784 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Sox3P53784 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox3P53784 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox3P53784 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Sox3P53784 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox3P53784 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.6■□□□□ 0.09
Sox3P53784 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox3P53784 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox3P53784 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox3P53784 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox3P53784 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Sox3P53784 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox3P53784 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sox3P53784 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Sox3P53784 Gm1401-201ENSMUST00000122048 772 ntBASIC15.6■□□□□ 0.09
Sox3P53784 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox3P53784 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.6■□□□□ 0.09
Sox3P53784 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.6■□□□□ 0.09
Sox3P53784 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.6■□□□□ 0.09
Sox3P53784 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.6■□□□□ 0.09
Sox3P53784 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Sox3P53784 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox3P53784 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox3P53784 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.6■□□□□ 0.09
Sox3P53784 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Sox3P53784 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox3P53784 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox3P53784 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox3P53784 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox3P53784 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox3P53784 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox3P53784 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox3P53784 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.6■□□□□ 0.09
Sox3P53784 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox3P53784 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox3P53784 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox3P53784 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox3P53784 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox3P53784 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Sox3P53784 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Sox3P53784 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
Sox3P53784 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox3P53784 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox3P53784 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox3P53784 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox3P53784 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Sox3P53784 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Sox3P53784 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Sox3P53784 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sox3P53784 Mir8112-201ENSMUST00000184382 131 ntBASIC15.59■□□□□ 0.09
Sox3P53784 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.59■□□□□ 0.09
Sox3P53784 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.59■□□□□ 0.09
Sox3P53784 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox3P53784 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox3P53784 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox3P53784 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox3P53784 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox3P53784 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox3P53784 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox3P53784 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sox3P53784 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox3P53784 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.59■□□□□ 0.09
Sox3P53784 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox3P53784 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Sox3P53784 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Sox3P53784 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.59■□□□□ 0.09
Sox3P53784 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox3P53784 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Sox3P53784 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Sox3P53784 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Sox3P53784 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Sox3P53784 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sox3P53784 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sox3P53784 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.58■□□□□ 0.08
Sox3P53784 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Sox3P53784 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sox3P53784 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sox3P53784 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sox3P53784 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sox3P53784 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sox3P53784 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sox3P53784 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Sox3P53784 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sox3P53784 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sox3P53784 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sox3P53784 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 124.2 ms