Protein–RNA interactions for Protein: P50446

Krt6a, Keratin, type II cytoskeletal 6A, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt6aP50446 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Krt6aP50446 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Krt6aP50446 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.23■□□□□ 0.19
Krt6aP50446 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Krt6aP50446 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Krt6aP50446 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Krt6aP50446 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Krt6aP50446 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Krt6aP50446 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Krt6aP50446 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.22■□□□□ 0.19
Krt6aP50446 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Krt6aP50446 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Krt6aP50446 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Krt6aP50446 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Krt6aP50446 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Krt6aP50446 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Krt6aP50446 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Krt6aP50446 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Krt6aP50446 Gm13186-201ENSMUST00000118031 316 ntBASIC16.22■□□□□ 0.19
Krt6aP50446 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.22■□□□□ 0.19
Krt6aP50446 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Krt6aP50446 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Krt6aP50446 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Krt6aP50446 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Krt6aP50446 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Krt6aP50446 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Krt6aP50446 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Krt6aP50446 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Krt6aP50446 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Krt6aP50446 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Krt6aP50446 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Krt6aP50446 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.22■□□□□ 0.19
Krt6aP50446 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Krt6aP50446 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Krt6aP50446 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Krt6aP50446 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Krt6aP50446 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Krt6aP50446 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Krt6aP50446 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Krt6aP50446 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Krt6aP50446 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Krt6aP50446 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.21■□□□□ 0.19
Krt6aP50446 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Krt6aP50446 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Krt6aP50446 Gm715-201ENSMUST00000117865 831 ntBASIC16.21■□□□□ 0.19
Krt6aP50446 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.21■□□□□ 0.19
Krt6aP50446 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.21■□□□□ 0.19
Krt6aP50446 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Krt6aP50446 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Krt6aP50446 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.21■□□□□ 0.19
Krt6aP50446 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.21■□□□□ 0.19
Krt6aP50446 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Krt6aP50446 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.21■□□□□ 0.19
Krt6aP50446 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Krt6aP50446 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.21■□□□□ 0.19
Krt6aP50446 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Krt6aP50446 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Krt6aP50446 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Krt6aP50446 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Krt6aP50446 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Krt6aP50446 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Krt6aP50446 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Krt6aP50446 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Krt6aP50446 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Krt6aP50446 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Krt6aP50446 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Krt6aP50446 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Krt6aP50446 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.2■□□□□ 0.18
Krt6aP50446 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.2■□□□□ 0.18
Krt6aP50446 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.2■□□□□ 0.18
Krt6aP50446 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Krt6aP50446 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Krt6aP50446 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Krt6aP50446 Phf7-203ENSMUST00000226565 1971 ntBASIC16.2■□□□□ 0.18
Krt6aP50446 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Krt6aP50446 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Krt6aP50446 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Krt6aP50446 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Krt6aP50446 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Krt6aP50446 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Krt6aP50446 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Krt6aP50446 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.19■□□□□ 0.18
Krt6aP50446 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.19■□□□□ 0.18
Krt6aP50446 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.19■□□□□ 0.18
Krt6aP50446 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.19■□□□□ 0.18
Krt6aP50446 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.19■□□□□ 0.18
Krt6aP50446 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.19■□□□□ 0.18
Krt6aP50446 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Krt6aP50446 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Krt6aP50446 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Krt6aP50446 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Krt6aP50446 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Krt6aP50446 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.19■□□□□ 0.18
Krt6aP50446 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Krt6aP50446 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Krt6aP50446 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Krt6aP50446 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Krt6aP50446 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Krt6aP50446 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Krt6aP50446 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms