Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-1P50220 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-1P50220 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Nkx2-1P50220 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-1P50220 Gm12896-201ENSMUST00000118430 226 ntBASIC13.59□□□□□ -0.23
Nkx2-1P50220 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-1P50220 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC13.59□□□□□ -0.23
Nkx2-1P50220 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-1P50220 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Nkx2-1P50220 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-1P50220 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-1P50220 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-1P50220 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Nkx2-1P50220 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-1P50220 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-1P50220 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Nkx2-1P50220 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Nkx2-1P50220 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Nkx2-1P50220 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Nkx2-1P50220 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Nkx2-1P50220 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Nkx2-1P50220 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Nkx2-1P50220 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Nkx2-1P50220 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Nkx2-1P50220 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-1P50220 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-1P50220 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.58□□□□□ -0.24
Nkx2-1P50220 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-1P50220 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-1P50220 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Nkx2-1P50220 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Nkx2-1P50220 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC13.58□□□□□ -0.24
Nkx2-1P50220 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC13.58□□□□□ -0.24
Nkx2-1P50220 AC166341.7-201ENSMUST00000221698 126 ntBASIC13.58□□□□□ -0.24
Nkx2-1P50220 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-1P50220 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-1P50220 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-1P50220 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-1P50220 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-1P50220 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-1P50220 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC13.58□□□□□ -0.24
Nkx2-1P50220 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-1P50220 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-1P50220 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.58□□□□□ -0.24
Nkx2-1P50220 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-1P50220 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Nkx2-1P50220 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-1P50220 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-1P50220 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-1P50220 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-1P50220 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-1P50220 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-1P50220 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Nkx2-1P50220 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-1P50220 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-1P50220 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Nkx2-1P50220 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-1P50220 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-1P50220 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-1P50220 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-1P50220 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-1P50220 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-1P50220 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Nkx2-1P50220 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-1P50220 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-1P50220 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-1P50220 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-1P50220 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-1P50220 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-1P50220 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-1P50220 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-1P50220 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Nkx2-1P50220 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-1P50220 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.57□□□□□ -0.24
Nkx2-1P50220 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.57□□□□□ -0.24
Nkx2-1P50220 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-1P50220 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-1P50220 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-1P50220 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-1P50220 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-1P50220 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-1P50220 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.57□□□□□ -0.24
Nkx2-1P50220 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-1P50220 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Nkx2-1P50220 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-1P50220 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Nkx2-1P50220 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-1P50220 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-1P50220 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-1P50220 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-1P50220 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-1P50220 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-1P50220 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-1P50220 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
Nkx2-1P50220 Prob1-201ENSMUST00000097619 3021 ntBASIC13.56□□□□□ -0.24
Nkx2-1P50220 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-1P50220 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-1P50220 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-1P50220 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-1P50220 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms