Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.34■□□□□ 0.53
Sdc2P43407 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.34■□□□□ 0.53
Sdc2P43407 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sdc2P43407 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sdc2P43407 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sdc2P43407 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sdc2P43407 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sdc2P43407 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sdc2P43407 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sdc2P43407 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sdc2P43407 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sdc2P43407 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sdc2P43407 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sdc2P43407 Zfp264-201ENSMUST00000208656 1563 ntBASIC18.34■□□□□ 0.53
Sdc2P43407 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sdc2P43407 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sdc2P43407 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Sdc2P43407 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sdc2P43407 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sdc2P43407 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sdc2P43407 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sdc2P43407 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sdc2P43407 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.33■□□□□ 0.53
Sdc2P43407 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sdc2P43407 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sdc2P43407 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sdc2P43407 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sdc2P43407 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sdc2P43407 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Sdc2P43407 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sdc2P43407 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sdc2P43407 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Sdc2P43407 Gm2274-201ENSMUST00000184539 609 ntBASIC18.33■□□□□ 0.52
Sdc2P43407 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.33■□□□□ 0.52
Sdc2P43407 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sdc2P43407 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Sdc2P43407 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sdc2P43407 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sdc2P43407 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sdc2P43407 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sdc2P43407 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sdc2P43407 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sdc2P43407 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sdc2P43407 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Sdc2P43407 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdc2P43407 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdc2P43407 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sdc2P43407 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdc2P43407 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdc2P43407 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sdc2P43407 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sdc2P43407 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Sdc2P43407 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Sdc2P43407 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdc2P43407 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdc2P43407 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdc2P43407 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdc2P43407 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.32■□□□□ 0.52
Sdc2P43407 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sdc2P43407 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sdc2P43407 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdc2P43407 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Sdc2P43407 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Sdc2P43407 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdc2P43407 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdc2P43407 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdc2P43407 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18.32■□□□□ 0.52
Sdc2P43407 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdc2P43407 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdc2P43407 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdc2P43407 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sdc2P43407 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdc2P43407 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sdc2P43407 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sdc2P43407 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.31■□□□□ 0.52
Sdc2P43407 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.31■□□□□ 0.52
Sdc2P43407 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC18.31■□□□□ 0.52
Sdc2P43407 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sdc2P43407 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Sdc2P43407 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.31■□□□□ 0.52
Sdc2P43407 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sdc2P43407 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Sdc2P43407 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sdc2P43407 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.31■□□□□ 0.52
Sdc2P43407 Gm44450-201ENSMUST00000199528 114 ntBASIC18.31■□□□□ 0.52
Sdc2P43407 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
Sdc2P43407 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sdc2P43407 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sdc2P43407 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sdc2P43407 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Sdc2P43407 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sdc2P43407 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sdc2P43407 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sdc2P43407 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sdc2P43407 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sdc2P43407 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Sdc2P43407 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Sdc2P43407 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sdc2P43407 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sdc2P43407 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms