Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Hist1h1aP43275 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Hist1h1aP43275 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Hist1h1aP43275 Gm12085-201ENSMUST00000119263 940 ntBASIC13.51□□□□□ -0.25
Hist1h1aP43275 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hist1h1aP43275 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Hist1h1aP43275 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hist1h1aP43275 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Hist1h1aP43275 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hist1h1aP43275 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hist1h1aP43275 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hist1h1aP43275 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hist1h1aP43275 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hist1h1aP43275 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hist1h1aP43275 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Hist1h1aP43275 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hist1h1aP43275 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.51□□□□□ -0.25
Hist1h1aP43275 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Hist1h1aP43275 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h1aP43275 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Hist1h1aP43275 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Hist1h1aP43275 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h1aP43275 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h1aP43275 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h1aP43275 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Hist1h1aP43275 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Hist1h1aP43275 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h1aP43275 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h1aP43275 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Hist1h1aP43275 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Hist1h1aP43275 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h1aP43275 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC13.5□□□□□ -0.25
Hist1h1aP43275 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC13.5□□□□□ -0.25
Hist1h1aP43275 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h1aP43275 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h1aP43275 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h1aP43275 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h1aP43275 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h1aP43275 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Hist1h1aP43275 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h1aP43275 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h1aP43275 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.5□□□□□ -0.25
Hist1h1aP43275 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.5□□□□□ -0.25
Hist1h1aP43275 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h1aP43275 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h1aP43275 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h1aP43275 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC13.49□□□□□ -0.25
Hist1h1aP43275 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h1aP43275 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Hist1h1aP43275 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h1aP43275 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Hist1h1aP43275 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h1aP43275 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h1aP43275 Gm27000-201ENSMUST00000182943 842 ntBASIC13.49□□□□□ -0.25
Hist1h1aP43275 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h1aP43275 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Hist1h1aP43275 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.49□□□□□ -0.25
Hist1h1aP43275 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h1aP43275 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h1aP43275 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h1aP43275 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Hist1h1aP43275 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h1aP43275 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h1aP43275 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h1aP43275 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h1aP43275 Gm7712-202ENSMUST00000222331 1510 ntBASIC13.49□□□□□ -0.25
Hist1h1aP43275 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Hist1h1aP43275 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hist1h1aP43275 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hist1h1aP43275 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.48□□□□□ -0.25
Hist1h1aP43275 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Hist1h1aP43275 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hist1h1aP43275 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.48□□□□□ -0.25
Hist1h1aP43275 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hist1h1aP43275 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hist1h1aP43275 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.48□□□□□ -0.25
Hist1h1aP43275 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hist1h1aP43275 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hist1h1aP43275 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hist1h1aP43275 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.48□□□□□ -0.25
Hist1h1aP43275 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hist1h1aP43275 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hist1h1aP43275 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hist1h1aP43275 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hist1h1aP43275 Gm7638-201ENSMUST00000121348 967 ntBASIC13.48□□□□□ -0.25
Hist1h1aP43275 Gm18958-201ENSMUST00000174258 762 ntBASIC13.48□□□□□ -0.25
Hist1h1aP43275 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hist1h1aP43275 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC13.48□□□□□ -0.25
Hist1h1aP43275 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hist1h1aP43275 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC13.48□□□□□ -0.25
Hist1h1aP43275 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hist1h1aP43275 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Hist1h1aP43275 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hist1h1aP43275 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Hist1h1aP43275 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hist1h1aP43275 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hist1h1aP43275 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hist1h1aP43275 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Hist1h1aP43275 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hist1h1aP43275 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms