Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HttP42859 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HttP42859 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HttP42859 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC17.38■□□□□ 0.37
HttP42859 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
HttP42859 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
HttP42859 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HttP42859 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HttP42859 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HttP42859 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HttP42859 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HttP42859 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC17.38■□□□□ 0.37
HttP42859 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HttP42859 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HttP42859 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HttP42859 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HttP42859 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HttP42859 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.37■□□□□ 0.37
HttP42859 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HttP42859 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC17.37■□□□□ 0.37
HttP42859 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
HttP42859 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
HttP42859 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HttP42859 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
HttP42859 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HttP42859 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.37■□□□□ 0.37
HttP42859 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC17.37■□□□□ 0.37
HttP42859 AC132467.2-202ENSMUST00000227726 559 ntBASIC17.37■□□□□ 0.37
HttP42859 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
HttP42859 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HttP42859 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.37■□□□□ 0.37
HttP42859 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HttP42859 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HttP42859 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HttP42859 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
HttP42859 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HttP42859 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HttP42859 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HttP42859 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC17.36■□□□□ 0.37
HttP42859 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
HttP42859 Thap2-203ENSMUST00000218989 527 ntBASIC17.36■□□□□ 0.37
HttP42859 AC124732.2-201ENSMUST00000221977 316 ntBASIC17.36■□□□□ 0.37
HttP42859 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HttP42859 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.36■□□□□ 0.37
HttP42859 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HttP42859 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
HttP42859 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HttP42859 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HttP42859 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
HttP42859 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.36■□□□□ 0.37
HttP42859 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HttP42859 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HttP42859 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HttP42859 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.35■□□□□ 0.37
HttP42859 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HttP42859 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
HttP42859 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.35■□□□□ 0.37
HttP42859 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
HttP42859 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
HttP42859 Gm7336-201ENSMUST00000107041 1232 ntBASIC17.35■□□□□ 0.37
HttP42859 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
HttP42859 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.35■□□□□ 0.37
HttP42859 AC155729.1-201ENSMUST00000227758 544 ntBASIC17.35■□□□□ 0.37
HttP42859 Gm42934-201ENSMUST00000196920 1345 ntBASIC17.35■□□□□ 0.37
HttP42859 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.35■□□□□ 0.37
HttP42859 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
HttP42859 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HttP42859 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HttP42859 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HttP42859 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HttP42859 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HttP42859 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HttP42859 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
HttP42859 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HttP42859 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HttP42859 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HttP42859 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HttP42859 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HttP42859 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HttP42859 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC17.34■□□□□ 0.37
HttP42859 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HttP42859 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC17.34■□□□□ 0.37
HttP42859 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.34■□□□□ 0.37
HttP42859 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HttP42859 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HttP42859 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HttP42859 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HttP42859 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HttP42859 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HttP42859 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.34■□□□□ 0.37
HttP42859 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.34■□□□□ 0.37
HttP42859 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HttP42859 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.34■□□□□ 0.37
HttP42859 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HttP42859 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
HttP42859 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HttP42859 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC17.33■□□□□ 0.37
HttP42859 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC17.33■□□□□ 0.37
HttP42859 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HttP42859 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms