Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LdlrP35951 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LdlrP35951 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LdlrP35951 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LdlrP35951 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LdlrP35951 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
LdlrP35951 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LdlrP35951 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
LdlrP35951 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LdlrP35951 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LdlrP35951 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LdlrP35951 AA414768-201ENSMUST00000121924 1257 ntBASIC16.26■□□□□ 0.19
LdlrP35951 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.26■□□□□ 0.19
LdlrP35951 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LdlrP35951 Gm45058-201ENSMUST00000205810 766 ntBASIC16.26■□□□□ 0.19
LdlrP35951 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LdlrP35951 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LdlrP35951 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LdlrP35951 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
LdlrP35951 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LdlrP35951 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.26■□□□□ 0.19
LdlrP35951 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LdlrP35951 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LdlrP35951 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LdlrP35951 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
LdlrP35951 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LdlrP35951 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
LdlrP35951 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
LdlrP35951 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LdlrP35951 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.25■□□□□ 0.19
LdlrP35951 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LdlrP35951 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LdlrP35951 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LdlrP35951 Gm7638-201ENSMUST00000121348 967 ntBASIC16.25■□□□□ 0.19
LdlrP35951 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LdlrP35951 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.25■□□□□ 0.19
LdlrP35951 Gm33142-201ENSMUST00000193913 867 ntBASIC16.25■□□□□ 0.19
LdlrP35951 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LdlrP35951 Il3ra-202ENSMUST00000223589 738 ntBASIC16.25■□□□□ 0.19
LdlrP35951 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LdlrP35951 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LdlrP35951 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LdlrP35951 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LdlrP35951 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LdlrP35951 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LdlrP35951 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
LdlrP35951 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LdlrP35951 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LdlrP35951 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
LdlrP35951 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LdlrP35951 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LdlrP35951 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LdlrP35951 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LdlrP35951 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.24■□□□□ 0.19
LdlrP35951 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.24■□□□□ 0.19
LdlrP35951 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LdlrP35951 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LdlrP35951 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LdlrP35951 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.24■□□□□ 0.19
LdlrP35951 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LdlrP35951 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LdlrP35951 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.24■□□□□ 0.19
LdlrP35951 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
LdlrP35951 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LdlrP35951 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LdlrP35951 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LdlrP35951 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LdlrP35951 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LdlrP35951 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LdlrP35951 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LdlrP35951 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LdlrP35951 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LdlrP35951 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LdlrP35951 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
LdlrP35951 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LdlrP35951 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LdlrP35951 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LdlrP35951 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LdlrP35951 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LdlrP35951 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LdlrP35951 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LdlrP35951 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LdlrP35951 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LdlrP35951 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LdlrP35951 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LdlrP35951 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
LdlrP35951 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LdlrP35951 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LdlrP35951 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LdlrP35951 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
LdlrP35951 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LdlrP35951 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LdlrP35951 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LdlrP35951 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LdlrP35951 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
LdlrP35951 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LdlrP35951 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LdlrP35951 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LdlrP35951 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LdlrP35951 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms