Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Mmp13P33435 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp13P33435 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp13P33435 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Mmp13P33435 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp13P33435 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp13P33435 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp13P33435 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp13P33435 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp13P33435 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp13P33435 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.74■□□□□ 0.27
Mmp13P33435 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Mmp13P33435 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.74■□□□□ 0.27
Mmp13P33435 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp13P33435 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.74■□□□□ 0.27
Mmp13P33435 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp13P33435 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp13P33435 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Mmp13P33435 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp13P33435 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Mmp13P33435 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp13P33435 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Mmp13P33435 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp13P33435 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp13P33435 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Mmp13P33435 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp13P33435 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp13P33435 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp13P33435 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp13P33435 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.74■□□□□ 0.27
Mmp13P33435 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp13P33435 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp13P33435 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp13P33435 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp13P33435 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp13P33435 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp13P33435 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp13P33435 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Mmp13P33435 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
Mmp13P33435 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp13P33435 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp13P33435 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp13P33435 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp13P33435 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.73■□□□□ 0.27
Mmp13P33435 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp13P33435 Gm45058-201ENSMUST00000205810 766 ntBASIC16.73■□□□□ 0.27
Mmp13P33435 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.73■□□□□ 0.27
Mmp13P33435 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp13P33435 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp13P33435 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp13P33435 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp13P33435 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp13P33435 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Mmp13P33435 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp13P33435 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Mmp13P33435 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp13P33435 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp13P33435 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp13P33435 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp13P33435 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp13P33435 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp13P33435 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Mmp13P33435 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp13P33435 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp13P33435 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
Mmp13P33435 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp13P33435 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp13P33435 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.72■□□□□ 0.27
Mmp13P33435 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.72■□□□□ 0.27
Mmp13P33435 Il3ra-202ENSMUST00000223589 738 ntBASIC16.72■□□□□ 0.27
Mmp13P33435 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp13P33435 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp13P33435 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp13P33435 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp13P33435 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp13P33435 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp13P33435 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp13P33435 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp13P33435 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.72■□□□□ 0.27
Mmp13P33435 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.72■□□□□ 0.27
Mmp13P33435 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.72■□□□□ 0.27
Mmp13P33435 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp13P33435 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp13P33435 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp13P33435 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp13P33435 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp13P33435 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp13P33435 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp13P33435 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp13P33435 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp13P33435 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp13P33435 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp13P33435 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.71■□□□□ 0.27
Mmp13P33435 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Mmp13P33435 Gm18958-201ENSMUST00000174258 762 ntBASIC16.71■□□□□ 0.27
Mmp13P33435 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.71■□□□□ 0.27
Mmp13P33435 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Mmp13P33435 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp13P33435 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp13P33435 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms