Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Mmp13P33435 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp13P33435 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp13P33435 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Mmp13P33435 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp13P33435 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp13P33435 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp13P33435 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp13P33435 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp13P33435 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp13P33435 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.74■□□□□ 0.27
Mmp13P33435 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Mmp13P33435 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.74■□□□□ 0.27
Mmp13P33435 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp13P33435 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.74■□□□□ 0.27
Mmp13P33435 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp13P33435 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp13P33435 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Mmp13P33435 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp13P33435 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Mmp13P33435 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp13P33435 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Mmp13P33435 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp13P33435 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp13P33435 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Mmp13P33435 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp13P33435 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp13P33435 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp13P33435 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp13P33435 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.74■□□□□ 0.27
Mmp13P33435 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp13P33435 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp13P33435 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp13P33435 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp13P33435 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp13P33435 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp13P33435 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp13P33435 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Mmp13P33435 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
Mmp13P33435 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp13P33435 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp13P33435 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp13P33435 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp13P33435 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.73■□□□□ 0.27
Mmp13P33435 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp13P33435 Gm45058-201ENSMUST00000205810 766 ntBASIC16.73■□□□□ 0.27
Mmp13P33435 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.73■□□□□ 0.27
Mmp13P33435 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp13P33435 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp13P33435 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp13P33435 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp13P33435 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp13P33435 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Mmp13P33435 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp13P33435 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Mmp13P33435 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp13P33435 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp13P33435 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp13P33435 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp13P33435 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp13P33435 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp13P33435 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Mmp13P33435 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp13P33435 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp13P33435 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
Mmp13P33435 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp13P33435 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp13P33435 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.72■□□□□ 0.27
Mmp13P33435 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.72■□□□□ 0.27
Mmp13P33435 Il3ra-202ENSMUST00000223589 738 ntBASIC16.72■□□□□ 0.27
Mmp13P33435 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp13P33435 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp13P33435 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp13P33435 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp13P33435 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp13P33435 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp13P33435 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp13P33435 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp13P33435 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.72■□□□□ 0.27
Mmp13P33435 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.72■□□□□ 0.27
Mmp13P33435 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.72■□□□□ 0.27
Mmp13P33435 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp13P33435 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp13P33435 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp13P33435 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp13P33435 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp13P33435 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp13P33435 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp13P33435 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp13P33435 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp13P33435 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp13P33435 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp13P33435 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.71■□□□□ 0.27
Mmp13P33435 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Mmp13P33435 Gm18958-201ENSMUST00000174258 762 ntBASIC16.71■□□□□ 0.27
Mmp13P33435 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.71■□□□□ 0.27
Mmp13P33435 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Mmp13P33435 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp13P33435 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp13P33435 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms