Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cd28P31041 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cd28P31041 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cd28P31041 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cd28P31041 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Cd28P31041 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cd28P31041 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cd28P31041 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cd28P31041 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cd28P31041 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cd28P31041 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cd28P31041 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cd28P31041 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cd28P31041 Gm27000-201ENSMUST00000182943 842 ntBASIC14.46□□□□□ -0.09
Cd28P31041 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cd28P31041 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.46□□□□□ -0.09
Cd28P31041 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cd28P31041 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Cd28P31041 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cd28P31041 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Cd28P31041 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cd28P31041 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC14.46□□□□□ -0.1
Cd28P31041 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Cd28P31041 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Cd28P31041 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cd28P31041 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cd28P31041 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cd28P31041 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cd28P31041 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cd28P31041 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cd28P31041 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cd28P31041 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cd28P31041 Gm37292-201ENSMUST00000192062 758 ntBASIC14.45□□□□□ -0.1
Cd28P31041 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cd28P31041 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cd28P31041 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cd28P31041 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cd28P31041 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cd28P31041 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cd28P31041 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Cd28P31041 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cd28P31041 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cd28P31041 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.45□□□□□ -0.1
Cd28P31041 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cd28P31041 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Cd28P31041 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cd28P31041 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cd28P31041 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Cd28P31041 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.45□□□□□ -0.1
Cd28P31041 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Cd28P31041 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cd28P31041 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cd28P31041 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cd28P31041 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cd28P31041 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cd28P31041 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cd28P31041 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cd28P31041 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.44□□□□□ -0.1
Cd28P31041 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cd28P31041 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cd28P31041 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cd28P31041 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.44□□□□□ -0.1
Cd28P31041 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cd28P31041 Gm18284-201ENSMUST00000172604 624 ntBASIC14.44□□□□□ -0.1
Cd28P31041 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC14.44□□□□□ -0.1
Cd28P31041 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC14.44□□□□□ -0.1
Cd28P31041 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cd28P31041 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Cd28P31041 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cd28P31041 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cd28P31041 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cd28P31041 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cd28P31041 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cd28P31041 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cd28P31041 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.44□□□□□ -0.1
Cd28P31041 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cd28P31041 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.43□□□□□ -0.1
Cd28P31041 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cd28P31041 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cd28P31041 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cd28P31041 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cd28P31041 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cd28P31041 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Cd28P31041 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cd28P31041 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cd28P31041 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cd28P31041 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cd28P31041 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cd28P31041 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cd28P31041 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cd28P31041 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cd28P31041 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.43□□□□□ -0.1
Cd28P31041 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC14.43□□□□□ -0.1
Cd28P31041 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cd28P31041 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cd28P31041 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.43□□□□□ -0.1
Cd28P31041 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cd28P31041 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cd28P31041 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cd28P31041 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms