Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp53P15975 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp53P15975 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp53P15975 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp53P15975 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp53P15975 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Usp53P15975 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Usp53P15975 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Usp53P15975 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.86■□□□□ 0.61
Usp53P15975 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp53P15975 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp53P15975 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp53P15975 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Usp53P15975 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp53P15975 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp53P15975 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp53P15975 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp53P15975 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Usp53P15975 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Usp53P15975 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp53P15975 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp53P15975 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Usp53P15975 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Usp53P15975 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Usp53P15975 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp53P15975 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Usp53P15975 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
Usp53P15975 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp53P15975 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.85■□□□□ 0.61
Usp53P15975 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.85■□□□□ 0.61
Usp53P15975 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Usp53P15975 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.85■□□□□ 0.61
Usp53P15975 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp53P15975 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp53P15975 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Usp53P15975 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Usp53P15975 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Usp53P15975 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp53P15975 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Usp53P15975 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
Usp53P15975 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp53P15975 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp53P15975 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.84■□□□□ 0.61
Usp53P15975 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp53P15975 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Usp53P15975 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp53P15975 Gm11452-201ENSMUST00000122376 690 ntBASIC18.84■□□□□ 0.61
Usp53P15975 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Usp53P15975 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.84■□□□□ 0.61
Usp53P15975 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.84■□□□□ 0.61
Usp53P15975 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.84■□□□□ 0.61
Usp53P15975 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp53P15975 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.84■□□□□ 0.61
Usp53P15975 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Usp53P15975 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Usp53P15975 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp53P15975 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp53P15975 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp53P15975 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp53P15975 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp53P15975 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Usp53P15975 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp53P15975 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp53P15975 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp53P15975 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp53P15975 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Usp53P15975 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp53P15975 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC18.83■□□□□ 0.61
Usp53P15975 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp53P15975 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
Usp53P15975 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.83■□□□□ 0.6
Usp53P15975 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.83■□□□□ 0.6
Usp53P15975 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp53P15975 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp53P15975 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Usp53P15975 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp53P15975 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp53P15975 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp53P15975 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Usp53P15975 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
Usp53P15975 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.82■□□□□ 0.6
Usp53P15975 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Usp53P15975 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Usp53P15975 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp53P15975 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp53P15975 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp53P15975 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Usp53P15975 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp53P15975 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Usp53P15975 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp53P15975 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Usp53P15975 Gm13216-201ENSMUST00000117145 591 ntBASIC18.82■□□□□ 0.6
Usp53P15975 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC18.82■□□□□ 0.6
Usp53P15975 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp53P15975 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp53P15975 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.82■□□□□ 0.6
Usp53P15975 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.82■□□□□ 0.6
Usp53P15975 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Usp53P15975 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp53P15975 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms