Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rb1P13405 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rb1P13405 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Rb1P13405 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rb1P13405 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rb1P13405 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rb1P13405 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rb1P13405 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rb1P13405 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rb1P13405 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.67■□□□□ 0.26
Rb1P13405 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rb1P13405 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.67■□□□□ 0.26
Rb1P13405 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.67■□□□□ 0.26
Rb1P13405 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rb1P13405 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rb1P13405 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Rb1P13405 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rb1P13405 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rb1P13405 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rb1P13405 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Rb1P13405 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rb1P13405 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.67■□□□□ 0.26
Rb1P13405 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rb1P13405 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rb1P13405 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.67■□□□□ 0.26
Rb1P13405 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.67■□□□□ 0.26
Rb1P13405 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rb1P13405 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rb1P13405 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Rb1P13405 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rb1P13405 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rb1P13405 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rb1P13405 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rb1P13405 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rb1P13405 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rb1P13405 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rb1P13405 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rb1P13405 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.67■□□□□ 0.26
Rb1P13405 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rb1P13405 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rb1P13405 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rb1P13405 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rb1P13405 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rb1P13405 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.66■□□□□ 0.26
Rb1P13405 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Rb1P13405 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rb1P13405 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rb1P13405 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Rb1P13405 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.66■□□□□ 0.26
Rb1P13405 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rb1P13405 Gm28659-201ENSMUST00000188013 759 ntBASIC16.66■□□□□ 0.26
Rb1P13405 Gm43514-201ENSMUST00000198852 424 ntBASIC16.66■□□□□ 0.26
Rb1P13405 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rb1P13405 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rb1P13405 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rb1P13405 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rb1P13405 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Rb1P13405 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Rb1P13405 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rb1P13405 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rb1P13405 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Rb1P13405 Gm10710-201ENSMUST00000047876 3971 ntBASIC16.65■□□□□ 0.26
Rb1P13405 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Rb1P13405 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rb1P13405 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.65■□□□□ 0.26
Rb1P13405 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rb1P13405 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Rb1P13405 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rb1P13405 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rb1P13405 Olfr129-201ENSMUST00000122318 993 ntBASIC16.65■□□□□ 0.26
Rb1P13405 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Rb1P13405 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.65■□□□□ 0.26
Rb1P13405 Gm6443-201ENSMUST00000203599 874 ntBASIC16.65■□□□□ 0.26
Rb1P13405 Gm34391-201ENSMUST00000203706 907 ntBASIC16.65■□□□□ 0.26
Rb1P13405 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.65■□□□□ 0.26
Rb1P13405 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rb1P13405 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rb1P13405 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rb1P13405 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rb1P13405 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rb1P13405 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rb1P13405 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rb1P13405 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rb1P13405 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Rb1P13405 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
Rb1P13405 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rb1P13405 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.64■□□□□ 0.25
Rb1P13405 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rb1P13405 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rb1P13405 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rb1P13405 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rb1P13405 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.64■□□□□ 0.25
Rb1P13405 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rb1P13405 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rb1P13405 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rb1P13405 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Rb1P13405 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rb1P13405 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rb1P13405 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rb1P13405 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms