Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cxcl1P12850 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cxcl1P12850 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Cxcl1P12850 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.55□□□□□ -0.24
Cxcl1P12850 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cxcl1P12850 Gm12527-201ENSMUST00000117967 564 ntBASIC13.55□□□□□ -0.24
Cxcl1P12850 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cxcl1P12850 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC13.55□□□□□ -0.24
Cxcl1P12850 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC13.55□□□□□ -0.24
Cxcl1P12850 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC13.55□□□□□ -0.24
Cxcl1P12850 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cxcl1P12850 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
Cxcl1P12850 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cxcl1P12850 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cxcl1P12850 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cxcl1P12850 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cxcl1P12850 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cxcl1P12850 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cxcl1P12850 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cxcl1P12850 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cxcl1P12850 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Cxcl1P12850 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cxcl1P12850 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl1P12850 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl1P12850 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl1P12850 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.54□□□□□ -0.24
Cxcl1P12850 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl1P12850 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl1P12850 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl1P12850 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.54□□□□□ -0.24
Cxcl1P12850 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl1P12850 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl1P12850 Gm13181-201ENSMUST00000120117 1069 ntBASIC13.54□□□□□ -0.24
Cxcl1P12850 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC13.54□□□□□ -0.24
Cxcl1P12850 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl1P12850 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl1P12850 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl1P12850 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl1P12850 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl1P12850 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl1P12850 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl1P12850 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl1P12850 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl1P12850 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl1P12850 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl1P12850 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl1P12850 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Cxcl1P12850 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl1P12850 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl1P12850 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.53□□□□□ -0.24
Cxcl1P12850 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl1P12850 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl1P12850 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl1P12850 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl1P12850 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl1P12850 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl1P12850 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl1P12850 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Cxcl1P12850 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl1P12850 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl1P12850 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl1P12850 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl1P12850 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Cxcl1P12850 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl1P12850 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC13.53□□□□□ -0.24
Cxcl1P12850 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl1P12850 AC175538.1-201ENSMUST00000225343 1269 ntBASIC13.53□□□□□ -0.24
Cxcl1P12850 AC135637.1-201ENSMUST00000227750 365 ntBASIC13.53□□□□□ -0.24
Cxcl1P12850 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl1P12850 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl1P12850 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl1P12850 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl1P12850 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl1P12850 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.53□□□□□ -0.24
Cxcl1P12850 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl1P12850 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl1P12850 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl1P12850 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Cxcl1P12850 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl1P12850 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl1P12850 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl1P12850 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cxcl1P12850 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cxcl1P12850 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cxcl1P12850 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cxcl1P12850 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cxcl1P12850 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cxcl1P12850 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cxcl1P12850 Gm13186-201ENSMUST00000118031 316 ntBASIC13.52□□□□□ -0.25
Cxcl1P12850 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.52□□□□□ -0.25
Cxcl1P12850 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.25
Cxcl1P12850 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cxcl1P12850 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cxcl1P12850 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cxcl1P12850 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Cxcl1P12850 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Cxcl1P12850 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cxcl1P12850 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cxcl1P12850 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.52□□□□□ -0.25
Cxcl1P12850 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms