Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC19.02■□□□□ 0.63
Col1a1P11087 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Col1a1P11087 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.02■□□□□ 0.63
Col1a1P11087 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Col1a1P11087 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.02■□□□□ 0.63
Col1a1P11087 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Col1a1P11087 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col1a1P11087 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col1a1P11087 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col1a1P11087 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col1a1P11087 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col1a1P11087 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col1a1P11087 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col1a1P11087 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col1a1P11087 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Col1a1P11087 Gm4609-201ENSMUST00000106443 1002 ntBASIC19.01■□□□□ 0.63
Col1a1P11087 Gm5138-201ENSMUST00000113842 1002 ntBASIC19.01■□□□□ 0.63
Col1a1P11087 Gm15191-201ENSMUST00000117933 1000 ntBASIC19.01■□□□□ 0.63
Col1a1P11087 Gm12182-201ENSMUST00000118655 1008 ntBASIC19.01■□□□□ 0.63
Col1a1P11087 Gm13882-201ENSMUST00000120886 1002 ntBASIC19.01■□□□□ 0.63
Col1a1P11087 Gm10284-201ENSMUST00000145057 1005 ntBASIC19.01■□□□□ 0.63
Col1a1P11087 Gm17271-201ENSMUST00000165535 355 ntBASIC19.01■□□□□ 0.63
Col1a1P11087 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col1a1P11087 Gm10481-201ENSMUST00000179228 1002 ntBASIC19.01■□□□□ 0.63
Col1a1P11087 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC19.01■□□□□ 0.63
Col1a1P11087 Gm2574-201ENSMUST00000181051 1002 ntBASIC19.01■□□□□ 0.63
Col1a1P11087 Gm3200-201ENSMUST00000181493 1002 ntBASIC19.01■□□□□ 0.63
Col1a1P11087 Gm8825-201ENSMUST00000182565 998 ntBASIC19.01■□□□□ 0.63
Col1a1P11087 Gm4518-201ENSMUST00000182638 718 ntBASIC19.01■□□□□ 0.63
Col1a1P11087 Gm8330-201ENSMUST00000182754 1008 ntBASIC19.01■□□□□ 0.63
Col1a1P11087 Gm4575-201ENSMUST00000182991 1002 ntBASIC19.01■□□□□ 0.63
Col1a1P11087 Gm8709-201ENSMUST00000183230 1012 ntBASIC19.01■□□□□ 0.63
Col1a1P11087 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col1a1P11087 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col1a1P11087 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Col1a1P11087 Gm10293-201ENSMUST00000076317 1002 ntBASIC19.01■□□□□ 0.63
Col1a1P11087 Gm6316-201ENSMUST00000082064 1020 ntBASIC19.01■□□□□ 0.63
Col1a1P11087 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col1a1P11087 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Col1a1P11087 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col1a1P11087 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Col1a1P11087 Gm44832-201ENSMUST00000208849 2303 ntBASIC19■□□□□ 0.63
Col1a1P11087 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19■□□□□ 0.63
Col1a1P11087 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col1a1P11087 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Col1a1P11087 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col1a1P11087 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
Col1a1P11087 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC19■□□□□ 0.63
Col1a1P11087 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col1a1P11087 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC19■□□□□ 0.63
Col1a1P11087 Gm37171-201ENSMUST00000192636 1185 ntBASIC19■□□□□ 0.63
Col1a1P11087 Gm45167-201ENSMUST00000208007 322 ntBASIC19■□□□□ 0.63
Col1a1P11087 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col1a1P11087 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col1a1P11087 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col1a1P11087 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19■□□□□ 0.63
Col1a1P11087 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Col1a1P11087 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Col1a1P11087 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.99■□□□□ 0.63
Col1a1P11087 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col1a1P11087 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col1a1P11087 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col1a1P11087 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col1a1P11087 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col1a1P11087 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
Col1a1P11087 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col1a1P11087 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
Col1a1P11087 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col1a1P11087 Gm4899-201ENSMUST00000178708 719 ntBASIC18.99■□□□□ 0.63
Col1a1P11087 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC18.99■□□□□ 0.63
Col1a1P11087 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col1a1P11087 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col1a1P11087 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col1a1P11087 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col1a1P11087 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col1a1P11087 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col1a1P11087 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col1a1P11087 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col1a1P11087 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col1a1P11087 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col1a1P11087 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Col1a1P11087 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col1a1P11087 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col1a1P11087 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.98■□□□□ 0.63
Col1a1P11087 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC18.98■□□□□ 0.63
Col1a1P11087 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Col1a1P11087 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Col1a1P11087 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.98■□□□□ 0.63
Col1a1P11087 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col1a1P11087 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col1a1P11087 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Col1a1P11087 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col1a1P11087 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col1a1P11087 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col1a1P11087 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Col1a1P11087 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col1a1P11087 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col1a1P11087 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col1a1P11087 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Col1a1P11087 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms