Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smim1P0C8K7 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smim1P0C8K7 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smim1P0C8K7 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smim1P0C8K7 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC11.31□□□□□ -0.6
Smim1P0C8K7 Mir2861-201ENSMUST00000175539 82 ntBASIC11.31□□□□□ -0.6
Smim1P0C8K7 Gm15820-201ENSMUST00000201566 728 ntBASIC11.31□□□□□ -0.6
Smim1P0C8K7 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC11.31□□□□□ -0.6
Smim1P0C8K7 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Smim1P0C8K7 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smim1P0C8K7 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smim1P0C8K7 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smim1P0C8K7 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smim1P0C8K7 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smim1P0C8K7 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Smim1P0C8K7 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smim1P0C8K7 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC11.31□□□□□ -0.6
Smim1P0C8K7 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smim1P0C8K7 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC11.31□□□□□ -0.6
Smim1P0C8K7 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC11.31□□□□□ -0.6
Smim1P0C8K7 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smim1P0C8K7 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smim1P0C8K7 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smim1P0C8K7 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smim1P0C8K7 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim1P0C8K7 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim1P0C8K7 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim1P0C8K7 Gm44291-201ENSMUST00000203102 2865 ntBASIC11.3□□□□□ -0.6
Smim1P0C8K7 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Smim1P0C8K7 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC11.3□□□□□ -0.6
Smim1P0C8K7 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim1P0C8K7 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim1P0C8K7 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim1P0C8K7 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smim1P0C8K7 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim1P0C8K7 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim1P0C8K7 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim1P0C8K7 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim1P0C8K7 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim1P0C8K7 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim1P0C8K7 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim1P0C8K7 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Smim1P0C8K7 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Smim1P0C8K7 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim1P0C8K7 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim1P0C8K7 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smim1P0C8K7 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Smim1P0C8K7 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC11.3□□□□□ -0.6
Smim1P0C8K7 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim1P0C8K7 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC11.3□□□□□ -0.6
Smim1P0C8K7 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC11.3□□□□□ -0.6
Smim1P0C8K7 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Smim1P0C8K7 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smim1P0C8K7 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim1P0C8K7 Gm37728-201ENSMUST00000195025 2292 ntBASIC11.3□□□□□ -0.6
Smim1P0C8K7 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim1P0C8K7 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smim1P0C8K7 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim1P0C8K7 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC11.3□□□□□ -0.6
Smim1P0C8K7 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smim1P0C8K7 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim1P0C8K7 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Smim1P0C8K7 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim1P0C8K7 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Smim1P0C8K7 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Smim1P0C8K7 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC11.3□□□□□ -0.6
Smim1P0C8K7 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim1P0C8K7 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim1P0C8K7 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim1P0C8K7 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim1P0C8K7 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim1P0C8K7 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim1P0C8K7 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Smim1P0C8K7 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smim1P0C8K7 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim1P0C8K7 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC11.29□□□□□ -0.6
Smim1P0C8K7 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC11.29□□□□□ -0.6
Smim1P0C8K7 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smim1P0C8K7 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Smim1P0C8K7 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim1P0C8K7 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim1P0C8K7 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim1P0C8K7 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim1P0C8K7 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim1P0C8K7 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim1P0C8K7 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC11.29□□□□□ -0.6
Smim1P0C8K7 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC11.29□□□□□ -0.6
Smim1P0C8K7 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim1P0C8K7 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim1P0C8K7 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smim1P0C8K7 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim1P0C8K7 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim1P0C8K7 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim1P0C8K7 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim1P0C8K7 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC11.29□□□□□ -0.6
Smim1P0C8K7 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim1P0C8K7 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim1P0C8K7 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC11.28□□□□□ -0.6
Smim1P0C8K7 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim1P0C8K7 Gm13034-201ENSMUST00000121342 3177 ntBASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms