Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Gm6623-201ENSMUST00000173570 544 ntBASIC14.19□□□□□ -0.14
PtcraP0C6B2 Gm45328-201ENSMUST00000210942 917 ntBASIC14.19□□□□□ -0.14
PtcraP0C6B2 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PtcraP0C6B2 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.19□□□□□ -0.14
PtcraP0C6B2 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PtcraP0C6B2 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PtcraP0C6B2 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PtcraP0C6B2 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PtcraP0C6B2 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PtcraP0C6B2 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PtcraP0C6B2 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PtcraP0C6B2 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.19□□□□□ -0.14
PtcraP0C6B2 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PtcraP0C6B2 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
PtcraP0C6B2 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.18□□□□□ -0.14
PtcraP0C6B2 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
PtcraP0C6B2 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PtcraP0C6B2 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
PtcraP0C6B2 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PtcraP0C6B2 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
PtcraP0C6B2 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
PtcraP0C6B2 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PtcraP0C6B2 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
PtcraP0C6B2 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PtcraP0C6B2 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PtcraP0C6B2 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
PtcraP0C6B2 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.18□□□□□ -0.14
PtcraP0C6B2 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.18□□□□□ -0.14
PtcraP0C6B2 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PtcraP0C6B2 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PtcraP0C6B2 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
PtcraP0C6B2 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PtcraP0C6B2 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
PtcraP0C6B2 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PtcraP0C6B2 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PtcraP0C6B2 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PtcraP0C6B2 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PtcraP0C6B2 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PtcraP0C6B2 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PtcraP0C6B2 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PtcraP0C6B2 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PtcraP0C6B2 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PtcraP0C6B2 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PtcraP0C6B2 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PtcraP0C6B2 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PtcraP0C6B2 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
PtcraP0C6B2 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
PtcraP0C6B2 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PtcraP0C6B2 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PtcraP0C6B2 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PtcraP0C6B2 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PtcraP0C6B2 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PtcraP0C6B2 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.17□□□□□ -0.14
PtcraP0C6B2 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PtcraP0C6B2 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PtcraP0C6B2 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
PtcraP0C6B2 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PtcraP0C6B2 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.17□□□□□ -0.14
PtcraP0C6B2 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
PtcraP0C6B2 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PtcraP0C6B2 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PtcraP0C6B2 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
PtcraP0C6B2 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PtcraP0C6B2 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PtcraP0C6B2 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PtcraP0C6B2 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.17□□□□□ -0.14
PtcraP0C6B2 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.17□□□□□ -0.14
PtcraP0C6B2 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PtcraP0C6B2 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PtcraP0C6B2 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PtcraP0C6B2 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PtcraP0C6B2 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PtcraP0C6B2 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PtcraP0C6B2 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PtcraP0C6B2 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PtcraP0C6B2 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PtcraP0C6B2 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PtcraP0C6B2 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PtcraP0C6B2 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
PtcraP0C6B2 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PtcraP0C6B2 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.17□□□□□ -0.14
PtcraP0C6B2 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PtcraP0C6B2 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PtcraP0C6B2 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PtcraP0C6B2 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PtcraP0C6B2 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PtcraP0C6B2 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PtcraP0C6B2 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
PtcraP0C6B2 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PtcraP0C6B2 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PtcraP0C6B2 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PtcraP0C6B2 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PtcraP0C6B2 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.16□□□□□ -0.14
PtcraP0C6B2 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
PtcraP0C6B2 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PtcraP0C6B2 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PtcraP0C6B2 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.16□□□□□ -0.14
PtcraP0C6B2 Gm29518-201ENSMUST00000190858 372 ntBASIC14.16□□□□□ -0.14
PtcraP0C6B2 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PtcraP0C6B2 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms