Protein–RNA interactions for Protein: P06323

T-cell receptor alpha chain V region CTL-F3, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06323 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P06323 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
P06323 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
P06323 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
P06323 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
P06323 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P06323 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
P06323 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
P06323 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
P06323 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P06323 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P06323 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P06323 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P06323 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P06323 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
P06323 Otx2os1-204ENSMUST00000227221 751 ntBASIC13.24□□□□□ -0.29
P06323 Odf3b-204ENSMUST00000227834 930 ntBASIC13.24□□□□□ -0.29
P06323 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P06323 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
P06323 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
P06323 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P06323 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
P06323 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P06323 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
P06323 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
P06323 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P06323 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P06323 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P06323 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
P06323 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
P06323 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
P06323 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P06323 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
P06323 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P06323 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
P06323 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
P06323 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P06323 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P06323 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC13.23□□□□□ -0.29
P06323 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P06323 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P06323 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
P06323 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P06323 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
P06323 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
P06323 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
P06323 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC13.23□□□□□ -0.29
P06323 Gm715-201ENSMUST00000117865 831 ntBASIC13.23□□□□□ -0.29
P06323 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.23□□□□□ -0.29
P06323 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC13.23□□□□□ -0.29
P06323 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC13.23□□□□□ -0.29
P06323 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P06323 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P06323 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P06323 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P06323 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P06323 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
P06323 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P06323 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
P06323 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
P06323 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
P06323 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
P06323 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P06323 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
P06323 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
P06323 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
P06323 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P06323 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P06323 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
P06323 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.23□□□□□ -0.29
P06323 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
P06323 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P06323 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
P06323 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P06323 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
P06323 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
P06323 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P06323 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
P06323 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
P06323 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
P06323 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P06323 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
P06323 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P06323 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC13.22□□□□□ -0.29
P06323 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC13.22□□□□□ -0.29
P06323 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
P06323 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P06323 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P06323 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P06323 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
P06323 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P06323 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.22□□□□□ -0.29
P06323 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
P06323 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
P06323 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P06323 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
P06323 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
P06323 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P06323 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
P06323 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms