Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hbb-b1P02088 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hbb-b1P02088 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hbb-b1P02088 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hbb-b1P02088 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hbb-b1P02088 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hbb-b1P02088 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hbb-b1P02088 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hbb-b1P02088 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Hbb-b1P02088 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hbb-b1P02088 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hbb-b1P02088 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Hbb-b1P02088 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Hbb-b1P02088 Gm11960-202ENSMUST00000181063 2858 ntBASIC11.57□□□□□ -0.56
Hbb-b1P02088 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hbb-b1P02088 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC11.57□□□□□ -0.56
Hbb-b1P02088 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hbb-b1P02088 Gm12251-201ENSMUST00000117893 792 ntBASIC11.57□□□□□ -0.56
Hbb-b1P02088 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC11.57□□□□□ -0.56
Hbb-b1P02088 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC11.57□□□□□ -0.56
Hbb-b1P02088 CT010467.1-202ENSMUST00000205406 714 ntBASIC11.57□□□□□ -0.56
Hbb-b1P02088 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC11.57□□□□□ -0.56
Hbb-b1P02088 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hbb-b1P02088 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hbb-b1P02088 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hbb-b1P02088 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Hbb-b1P02088 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hbb-b1P02088 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hbb-b1P02088 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Hbb-b1P02088 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hbb-b1P02088 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hbb-b1P02088 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hbb-b1P02088 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hbb-b1P02088 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC11.57□□□□□ -0.56
Hbb-b1P02088 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hbb-b1P02088 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hbb-b1P02088 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hbb-b1P02088 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hbb-b1P02088 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hbb-b1P02088 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hbb-b1P02088 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hbb-b1P02088 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC11.56□□□□□ -0.56
Hbb-b1P02088 Gm29340-201ENSMUST00000188763 3854 ntBASIC11.56□□□□□ -0.56
Hbb-b1P02088 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hbb-b1P02088 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hbb-b1P02088 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hbb-b1P02088 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC11.56□□□□□ -0.56
Hbb-b1P02088 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC11.56□□□□□ -0.56
Hbb-b1P02088 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hbb-b1P02088 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC11.56□□□□□ -0.56
Hbb-b1P02088 Flvcr1-202ENSMUST00000191946 1216 ntBASIC11.56□□□□□ -0.56
Hbb-b1P02088 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC11.56□□□□□ -0.56
Hbb-b1P02088 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC11.56□□□□□ -0.56
Hbb-b1P02088 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hbb-b1P02088 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Hbb-b1P02088 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
Hbb-b1P02088 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hbb-b1P02088 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hbb-b1P02088 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hbb-b1P02088 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hbb-b1P02088 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hbb-b1P02088 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hbb-b1P02088 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hbb-b1P02088 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hbb-b1P02088 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hbb-b1P02088 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hbb-b1P02088 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hbb-b1P02088 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hbb-b1P02088 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hbb-b1P02088 Gm38058-201ENSMUST00000194323 4368 ntBASIC11.55□□□□□ -0.56
Hbb-b1P02088 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hbb-b1P02088 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hbb-b1P02088 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hbb-b1P02088 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hbb-b1P02088 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hbb-b1P02088 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Hbb-b1P02088 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Hbb-b1P02088 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC11.55□□□□□ -0.56
Hbb-b1P02088 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Hbb-b1P02088 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Hbb-b1P02088 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hbb-b1P02088 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Hbb-b1P02088 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hbb-b1P02088 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hbb-b1P02088 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hbb-b1P02088 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hbb-b1P02088 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Hbb-b1P02088 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hbb-b1P02088 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Hbb-b1P02088 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC11.55□□□□□ -0.56
Hbb-b1P02088 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hbb-b1P02088 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hbb-b1P02088 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hbb-b1P02088 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hbb-b1P02088 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Hbb-b1P02088 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hbb-b1P02088 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hbb-b1P02088 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC11.54□□□□□ -0.56
Hbb-b1P02088 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hbb-b1P02088 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms