Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Matn4O89029 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Matn4O89029 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Matn4O89029 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Matn4O89029 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Matn4O89029 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
Matn4O89029 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Matn4O89029 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Matn4O89029 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.43■□□□□ 0.06
Matn4O89029 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.43■□□□□ 0.06
Matn4O89029 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.43■□□□□ 0.06
Matn4O89029 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC15.43■□□□□ 0.06
Matn4O89029 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Matn4O89029 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Matn4O89029 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Matn4O89029 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.43■□□□□ 0.06
Matn4O89029 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Matn4O89029 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Matn4O89029 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Matn4O89029 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Matn4O89029 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Matn4O89029 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Matn4O89029 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Matn4O89029 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Matn4O89029 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Matn4O89029 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Matn4O89029 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Matn4O89029 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Matn4O89029 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Matn4O89029 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Matn4O89029 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Matn4O89029 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Matn4O89029 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Matn4O89029 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Matn4O89029 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Matn4O89029 Gm11539-201ENSMUST00000119837 557 ntBASIC15.42■□□□□ 0.06
Matn4O89029 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Matn4O89029 Gm10653-202ENSMUST00000139570 835 ntBASIC15.42■□□□□ 0.06
Matn4O89029 Gm21814-202ENSMUST00000203277 873 ntBASIC15.42■□□□□ 0.06
Matn4O89029 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.42■□□□□ 0.06
Matn4O89029 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Matn4O89029 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Matn4O89029 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Matn4O89029 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Matn4O89029 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Matn4O89029 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Matn4O89029 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Matn4O89029 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Matn4O89029 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.42■□□□□ 0.06
Matn4O89029 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Matn4O89029 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Matn4O89029 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Matn4O89029 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.42■□□□□ 0.06
Matn4O89029 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Matn4O89029 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Matn4O89029 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Matn4O89029 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Matn4O89029 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Matn4O89029 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.41■□□□□ 0.06
Matn4O89029 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Matn4O89029 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Matn4O89029 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Matn4O89029 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Matn4O89029 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Matn4O89029 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Matn4O89029 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Matn4O89029 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.41■□□□□ 0.06
Matn4O89029 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Matn4O89029 Gm715-201ENSMUST00000117865 831 ntBASIC15.41■□□□□ 0.06
Matn4O89029 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Matn4O89029 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Matn4O89029 Gm20760-201ENSMUST00000179197 648 ntBASIC15.41■□□□□ 0.06
Matn4O89029 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.41■□□□□ 0.06
Matn4O89029 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Matn4O89029 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Matn4O89029 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Matn4O89029 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Matn4O89029 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Matn4O89029 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Matn4O89029 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Matn4O89029 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Matn4O89029 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Matn4O89029 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Matn4O89029 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Matn4O89029 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Matn4O89029 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Matn4O89029 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Matn4O89029 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Matn4O89029 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.4■□□□□ 0.06
Matn4O89029 Asic1-205ENSMUST00000228185 1818 ntBASIC15.4■□□□□ 0.06
Matn4O89029 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Matn4O89029 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Matn4O89029 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Matn4O89029 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.4■□□□□ 0.06
Matn4O89029 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Matn4O89029 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Matn4O89029 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Matn4O89029 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.4■□□□□ 0.06
Matn4O89029 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Matn4O89029 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms