Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Syn1O88935 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Syn1O88935 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Syn1O88935 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Syn1O88935 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Syn1O88935 Gm4459-201ENSMUST00000118750 468 ntBASIC16.78■□□□□ 0.28
Syn1O88935 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Syn1O88935 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Syn1O88935 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.78■□□□□ 0.28
Syn1O88935 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Syn1O88935 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Syn1O88935 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Syn1O88935 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Syn1O88935 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Syn1O88935 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.78■□□□□ 0.28
Syn1O88935 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Syn1O88935 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Syn1O88935 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Syn1O88935 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Syn1O88935 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Syn1O88935 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
Syn1O88935 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Syn1O88935 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Syn1O88935 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Syn1O88935 Gm13616-201ENSMUST00000120600 222 ntBASIC16.77■□□□□ 0.28
Syn1O88935 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.77■□□□□ 0.28
Syn1O88935 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.77■□□□□ 0.28
Syn1O88935 Gm20949-201ENSMUST00000206478 952 ntBASIC16.77■□□□□ 0.28
Syn1O88935 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Syn1O88935 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Syn1O88935 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Syn1O88935 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Syn1O88935 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Syn1O88935 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Syn1O88935 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Syn1O88935 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Syn1O88935 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Syn1O88935 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Syn1O88935 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Syn1O88935 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.76■□□□□ 0.27
Syn1O88935 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Syn1O88935 Gm12497-201ENSMUST00000138778 237 ntBASIC16.76■□□□□ 0.27
Syn1O88935 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.76■□□□□ 0.27
Syn1O88935 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.76■□□□□ 0.27
Syn1O88935 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Syn1O88935 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Syn1O88935 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Syn1O88935 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.76■□□□□ 0.27
Syn1O88935 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Syn1O88935 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Syn1O88935 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Syn1O88935 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Syn1O88935 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Syn1O88935 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.75■□□□□ 0.27
Syn1O88935 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Syn1O88935 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Syn1O88935 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Syn1O88935 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Syn1O88935 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Syn1O88935 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Syn1O88935 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Syn1O88935 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Syn1O88935 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Syn1O88935 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.75■□□□□ 0.27
Syn1O88935 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Syn1O88935 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.75■□□□□ 0.27
Syn1O88935 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC16.75■□□□□ 0.27
Syn1O88935 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.75■□□□□ 0.27
Syn1O88935 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Syn1O88935 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Syn1O88935 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Syn1O88935 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Syn1O88935 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Syn1O88935 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Syn1O88935 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Syn1O88935 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Syn1O88935 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Syn1O88935 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Syn1O88935 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Syn1O88935 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Syn1O88935 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Syn1O88935 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Syn1O88935 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Syn1O88935 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Syn1O88935 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Syn1O88935 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Syn1O88935 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Syn1O88935 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Syn1O88935 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC16.74■□□□□ 0.27
Syn1O88935 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Syn1O88935 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.74■□□□□ 0.27
Syn1O88935 Gm8655-201ENSMUST00000221159 852 ntBASIC16.74■□□□□ 0.27
Syn1O88935 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.74■□□□□ 0.27
Syn1O88935 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Syn1O88935 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Syn1O88935 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Syn1O88935 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Syn1O88935 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Syn1O88935 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Syn1O88935 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms