Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Apaf1O88879 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Apaf1O88879 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Apaf1O88879 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Apaf1O88879 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Apaf1O88879 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Apaf1O88879 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
Apaf1O88879 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Apaf1O88879 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Apaf1O88879 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Apaf1O88879 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC21.2■□□□□ 0.98
Apaf1O88879 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Apaf1O88879 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC21.2■□□□□ 0.98
Apaf1O88879 Umpk-ps-201ENSMUST00000211897 827 ntBASIC21.2■□□□□ 0.98
Apaf1O88879 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Apaf1O88879 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
Apaf1O88879 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Apaf1O88879 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Apaf1O88879 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Apaf1O88879 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Apaf1O88879 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Apaf1O88879 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Apaf1O88879 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Apaf1O88879 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Apaf1O88879 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Apaf1O88879 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Apaf1O88879 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Apaf1O88879 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Apaf1O88879 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC21.19■□□□□ 0.98
Apaf1O88879 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
Apaf1O88879 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC21.19■□□□□ 0.98
Apaf1O88879 Gm27867-201ENSMUST00000184778 125 ntBASIC21.19■□□□□ 0.98
Apaf1O88879 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
Apaf1O88879 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
Apaf1O88879 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC21.19■□□□□ 0.98
Apaf1O88879 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Apaf1O88879 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Apaf1O88879 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Apaf1O88879 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Apaf1O88879 Gm32996-201ENSMUST00000199828 1447 ntBASIC21.19■□□□□ 0.98
Apaf1O88879 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Apaf1O88879 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC21.19■□□□□ 0.98
Apaf1O88879 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Apaf1O88879 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Apaf1O88879 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Apaf1O88879 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Apaf1O88879 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Apaf1O88879 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Apaf1O88879 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Apaf1O88879 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC21.18■□□□□ 0.98
Apaf1O88879 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC21.18■□□□□ 0.98
Apaf1O88879 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC21.18■□□□□ 0.98
Apaf1O88879 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC21.18■□□□□ 0.98
Apaf1O88879 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Apaf1O88879 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Apaf1O88879 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Apaf1O88879 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Apaf1O88879 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Apaf1O88879 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Apaf1O88879 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Apaf1O88879 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Apaf1O88879 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Apaf1O88879 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Apaf1O88879 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Apaf1O88879 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Apaf1O88879 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Apaf1O88879 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Apaf1O88879 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Apaf1O88879 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Apaf1O88879 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Apaf1O88879 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Apaf1O88879 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Apaf1O88879 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Apaf1O88879 Gm24589-201ENSMUST00000116692 94 ntBASIC21.17■□□□□ 0.98
Apaf1O88879 Gm15372-201ENSMUST00000120729 834 ntBASIC21.17■□□□□ 0.98
Apaf1O88879 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Apaf1O88879 Rprl3-201ENSMUST00000157400 290 ntBASIC21.17■□□□□ 0.98
Apaf1O88879 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC21.17■□□□□ 0.98
Apaf1O88879 AC114585.2-202ENSMUST00000228094 426 ntBASIC21.17■□□□□ 0.98
Apaf1O88879 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
Apaf1O88879 AC132265.1-201ENSMUST00000219233 1665 ntBASIC21.17■□□□□ 0.98
Apaf1O88879 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC21.17■□□□□ 0.98
Apaf1O88879 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Apaf1O88879 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Apaf1O88879 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Apaf1O88879 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Apaf1O88879 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Apaf1O88879 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Apaf1O88879 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Apaf1O88879 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Apaf1O88879 Haglr-201ENSMUST00000100000 2085 ntBASIC21.16■□□□□ 0.98
Apaf1O88879 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Apaf1O88879 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Apaf1O88879 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Apaf1O88879 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Apaf1O88879 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Apaf1O88879 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Apaf1O88879 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Apaf1O88879 Gm7935-201ENSMUST00000100555 1278 ntBASIC21.16■□□□□ 0.98
Apaf1O88879 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms