Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Hcn3O88705 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Hcn3O88705 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hcn3O88705 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hcn3O88705 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Hcn3O88705 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hcn3O88705 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hcn3O88705 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hcn3O88705 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hcn3O88705 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hcn3O88705 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hcn3O88705 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
Hcn3O88705 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hcn3O88705 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Hcn3O88705 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hcn3O88705 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hcn3O88705 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hcn3O88705 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Hcn3O88705 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC15.66■□□□□ 0.1
Hcn3O88705 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.66■□□□□ 0.1
Hcn3O88705 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.66■□□□□ 0.1
Hcn3O88705 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hcn3O88705 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hcn3O88705 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hcn3O88705 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hcn3O88705 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hcn3O88705 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hcn3O88705 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hcn3O88705 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hcn3O88705 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.66■□□□□ 0.1
Hcn3O88705 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hcn3O88705 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hcn3O88705 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Hcn3O88705 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hcn3O88705 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hcn3O88705 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hcn3O88705 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Hcn3O88705 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.65■□□□□ 0.1
Hcn3O88705 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.65■□□□□ 0.1
Hcn3O88705 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hcn3O88705 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hcn3O88705 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hcn3O88705 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hcn3O88705 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Hcn3O88705 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hcn3O88705 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.65■□□□□ 0.1
Hcn3O88705 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Hcn3O88705 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hcn3O88705 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hcn3O88705 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.65■□□□□ 0.1
Hcn3O88705 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.65■□□□□ 0.1
Hcn3O88705 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hcn3O88705 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Hcn3O88705 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hcn3O88705 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Hcn3O88705 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hcn3O88705 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Hcn3O88705 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hcn3O88705 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.64■□□□□ 0.09
Hcn3O88705 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Hcn3O88705 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hcn3O88705 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hcn3O88705 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hcn3O88705 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC15.64■□□□□ 0.09
Hcn3O88705 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hcn3O88705 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Hcn3O88705 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hcn3O88705 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.64■□□□□ 0.09
Hcn3O88705 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hcn3O88705 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hcn3O88705 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hcn3O88705 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Hcn3O88705 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Hcn3O88705 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hcn3O88705 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hcn3O88705 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Hcn3O88705 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Hcn3O88705 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hcn3O88705 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hcn3O88705 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hcn3O88705 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hcn3O88705 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.63■□□□□ 0.09
Hcn3O88705 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hcn3O88705 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hcn3O88705 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hcn3O88705 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hcn3O88705 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hcn3O88705 Gm37292-201ENSMUST00000192062 758 ntBASIC15.63■□□□□ 0.09
Hcn3O88705 Gm4974-201ENSMUST00000209974 875 ntBASIC15.63■□□□□ 0.09
Hcn3O88705 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC15.63■□□□□ 0.09
Hcn3O88705 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hcn3O88705 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hcn3O88705 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.63■□□□□ 0.09
Hcn3O88705 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hcn3O88705 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hcn3O88705 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hcn3O88705 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Hcn3O88705 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hcn3O88705 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hcn3O88705 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms