Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hcn1O88704 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hcn1O88704 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hcn1O88704 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hcn1O88704 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Hcn1O88704 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Hcn1O88704 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hcn1O88704 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hcn1O88704 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Hcn1O88704 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hcn1O88704 Gm22697-201ENSMUST00000175194 63 ntBASIC15.65■□□□□ 0.1
Hcn1O88704 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Hcn1O88704 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.65■□□□□ 0.1
Hcn1O88704 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hcn1O88704 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hcn1O88704 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Hcn1O88704 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Hcn1O88704 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hcn1O88704 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Hcn1O88704 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Hcn1O88704 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hcn1O88704 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hcn1O88704 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hcn1O88704 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Hcn1O88704 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hcn1O88704 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hcn1O88704 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hcn1O88704 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hcn1O88704 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hcn1O88704 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Hcn1O88704 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hcn1O88704 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hcn1O88704 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hcn1O88704 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Hcn1O88704 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Hcn1O88704 Gm7213-201ENSMUST00000215977 950 ntBASIC15.64■□□□□ 0.09
Hcn1O88704 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hcn1O88704 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.64■□□□□ 0.09
Hcn1O88704 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Hcn1O88704 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hcn1O88704 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hcn1O88704 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hcn1O88704 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.64■□□□□ 0.09
Hcn1O88704 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hcn1O88704 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Hcn1O88704 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Hcn1O88704 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hcn1O88704 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.64■□□□□ 0.09
Hcn1O88704 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Hcn1O88704 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hcn1O88704 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hcn1O88704 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hcn1O88704 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Hcn1O88704 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hcn1O88704 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hcn1O88704 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hcn1O88704 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Hcn1O88704 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.63■□□□□ 0.09
Hcn1O88704 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hcn1O88704 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Hcn1O88704 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
Hcn1O88704 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hcn1O88704 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hcn1O88704 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hcn1O88704 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hcn1O88704 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hcn1O88704 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Hcn1O88704 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hcn1O88704 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hcn1O88704 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.63■□□□□ 0.09
Hcn1O88704 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hcn1O88704 Mir1668-201ENSMUST00000184114 107 ntBASIC15.63■□□□□ 0.09
Hcn1O88704 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hcn1O88704 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hcn1O88704 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hcn1O88704 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
Hcn1O88704 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.63■□□□□ 0.09
Hcn1O88704 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Hcn1O88704 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hcn1O88704 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hcn1O88704 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Hcn1O88704 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hcn1O88704 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Hcn1O88704 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hcn1O88704 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.63■□□□□ 0.09
Hcn1O88704 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hcn1O88704 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.62■□□□□ 0.09
Hcn1O88704 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Hcn1O88704 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hcn1O88704 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.62■□□□□ 0.09
Hcn1O88704 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hcn1O88704 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hcn1O88704 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.62■□□□□ 0.09
Hcn1O88704 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hcn1O88704 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hcn1O88704 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.62■□□□□ 0.09
Hcn1O88704 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Hcn1O88704 Gm27000-201ENSMUST00000182943 842 ntBASIC15.62■□□□□ 0.09
Hcn1O88704 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hcn1O88704 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms