Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a20bO88575 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a20bO88575 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a20bO88575 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a20bO88575 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a20bO88575 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a20bO88575 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a20bO88575 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a20bO88575 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a20bO88575 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a20bO88575 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Slc6a20bO88575 Mir6956-201ENSMUST00000183598 62 ntBASIC17.75■□□□□ 0.43
Slc6a20bO88575 Gm5253-201ENSMUST00000187104 1025 ntBASIC17.75■□□□□ 0.43
Slc6a20bO88575 AC131709.1-201ENSMUST00000224731 1180 ntBASIC17.75■□□□□ 0.43
Slc6a20bO88575 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.75■□□□□ 0.43
Slc6a20bO88575 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a20bO88575 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Slc6a20bO88575 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Slc6a20bO88575 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.75■□□□□ 0.43
Slc6a20bO88575 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a20bO88575 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a20bO88575 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a20bO88575 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a20bO88575 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Slc6a20bO88575 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a20bO88575 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Slc6a20bO88575 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a20bO88575 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.74■□□□□ 0.43
Slc6a20bO88575 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a20bO88575 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a20bO88575 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a20bO88575 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a20bO88575 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a20bO88575 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a20bO88575 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC17.74■□□□□ 0.43
Slc6a20bO88575 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.74■□□□□ 0.43
Slc6a20bO88575 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC17.74■□□□□ 0.43
Slc6a20bO88575 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a20bO88575 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a20bO88575 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a20bO88575 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a20bO88575 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a20bO88575 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a20bO88575 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Slc6a20bO88575 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a20bO88575 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a20bO88575 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a20bO88575 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a20bO88575 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a20bO88575 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a20bO88575 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a20bO88575 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.74■□□□□ 0.43
Slc6a20bO88575 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a20bO88575 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a20bO88575 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a20bO88575 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Slc6a20bO88575 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a20bO88575 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a20bO88575 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a20bO88575 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a20bO88575 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Slc6a20bO88575 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.73■□□□□ 0.43
Slc6a20bO88575 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Slc6a20bO88575 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a20bO88575 Gm27321-201ENSMUST00000185021 205 ntBASIC17.73■□□□□ 0.43
Slc6a20bO88575 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.73■□□□□ 0.43
Slc6a20bO88575 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.73■□□□□ 0.43
Slc6a20bO88575 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a20bO88575 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Slc6a20bO88575 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a20bO88575 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a20bO88575 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a20bO88575 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a20bO88575 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a20bO88575 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Slc6a20bO88575 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a20bO88575 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a20bO88575 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a20bO88575 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a20bO88575 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a20bO88575 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a20bO88575 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Slc6a20bO88575 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.72■□□□□ 0.43
Slc6a20bO88575 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a20bO88575 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a20bO88575 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a20bO88575 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a20bO88575 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a20bO88575 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a20bO88575 Gm17271-201ENSMUST00000165535 355 ntBASIC17.72■□□□□ 0.43
Slc6a20bO88575 Gm18622-201ENSMUST00000219361 595 ntBASIC17.72■□□□□ 0.43
Slc6a20bO88575 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a20bO88575 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a20bO88575 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a20bO88575 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a20bO88575 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Slc6a20bO88575 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a20bO88575 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.72■□□□□ 0.43
Slc6a20bO88575 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a20bO88575 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms