Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC15.85■□□□□ 0.13
Cacna1hO88427 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cacna1hO88427 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.85■□□□□ 0.13
Cacna1hO88427 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cacna1hO88427 Gm43630-201ENSMUST00000201550 776 ntBASIC15.85■□□□□ 0.13
Cacna1hO88427 Rassf8-202ENSMUST00000058538 1131 ntBASIC15.85■□□□□ 0.13
Cacna1hO88427 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Cacna1hO88427 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cacna1hO88427 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Cacna1hO88427 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Cacna1hO88427 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cacna1hO88427 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cacna1hO88427 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cacna1hO88427 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cacna1hO88427 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cacna1hO88427 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Cacna1hO88427 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cacna1hO88427 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cacna1hO88427 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.84■□□□□ 0.13
Cacna1hO88427 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15.84■□□□□ 0.13
Cacna1hO88427 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Cacna1hO88427 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Cacna1hO88427 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cacna1hO88427 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cacna1hO88427 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Cacna1hO88427 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cacna1hO88427 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cacna1hO88427 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cacna1hO88427 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cacna1hO88427 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cacna1hO88427 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cacna1hO88427 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cacna1hO88427 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cacna1hO88427 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cacna1hO88427 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.84■□□□□ 0.13
Cacna1hO88427 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cacna1hO88427 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cacna1hO88427 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Cacna1hO88427 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cacna1hO88427 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cacna1hO88427 AC159621.2-201ENSMUST00000223519 1326 ntBASIC15.83■□□□□ 0.13
Cacna1hO88427 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cacna1hO88427 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cacna1hO88427 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cacna1hO88427 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.83■□□□□ 0.12
Cacna1hO88427 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC15.83■□□□□ 0.12
Cacna1hO88427 Gm43125-201ENSMUST00000201724 730 ntBASIC15.83■□□□□ 0.12
Cacna1hO88427 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cacna1hO88427 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cacna1hO88427 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cacna1hO88427 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cacna1hO88427 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cacna1hO88427 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cacna1hO88427 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cacna1hO88427 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cacna1hO88427 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cacna1hO88427 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cacna1hO88427 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC15.83■□□□□ 0.12
Cacna1hO88427 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Cacna1hO88427 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cacna1hO88427 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cacna1hO88427 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cacna1hO88427 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Cacna1hO88427 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cacna1hO88427 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1hO88427 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1hO88427 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1hO88427 Dapk1-207ENSMUST00000226059 5009 ntBASIC15.82■□□□□ 0.12
Cacna1hO88427 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1hO88427 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.82■□□□□ 0.12
Cacna1hO88427 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1hO88427 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1hO88427 Gm6912-201ENSMUST00000117218 544 ntBASIC15.82■□□□□ 0.12
Cacna1hO88427 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.82■□□□□ 0.12
Cacna1hO88427 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1hO88427 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Cacna1hO88427 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Cacna1hO88427 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1hO88427 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.82■□□□□ 0.12
Cacna1hO88427 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1hO88427 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1hO88427 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1hO88427 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1hO88427 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1hO88427 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1hO88427 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.82■□□□□ 0.12
Cacna1hO88427 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1hO88427 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1hO88427 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1hO88427 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Cacna1hO88427 Gtpbp10-211ENSMUST00000198799 648 ntBASIC15.82■□□□□ 0.12
Cacna1hO88427 Gm7730-201ENSMUST00000212486 454 ntBASIC15.82■□□□□ 0.12
Cacna1hO88427 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Cacna1hO88427 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Cacna1hO88427 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cacna1hO88427 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cacna1hO88427 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cacna1hO88427 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cacna1hO88427 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cacna1hO88427 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms