Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tgfbr3O88393 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tgfbr3O88393 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.49■□□□□ 0.07
Tgfbr3O88393 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Tgfbr3O88393 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tgfbr3O88393 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Tgfbr3O88393 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tgfbr3O88393 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tgfbr3O88393 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tgfbr3O88393 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Tgfbr3O88393 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Tgfbr3O88393 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.49■□□□□ 0.07
Tgfbr3O88393 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.49■□□□□ 0.07
Tgfbr3O88393 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.49■□□□□ 0.07
Tgfbr3O88393 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.49■□□□□ 0.07
Tgfbr3O88393 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tgfbr3O88393 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.49■□□□□ 0.07
Tgfbr3O88393 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Tgfbr3O88393 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Tgfbr3O88393 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Tgfbr3O88393 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tgfbr3O88393 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.49■□□□□ 0.07
Tgfbr3O88393 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tgfbr3O88393 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tgfbr3O88393 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tgfbr3O88393 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.49■□□□□ 0.07
Tgfbr3O88393 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Tgfbr3O88393 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tgfbr3O88393 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tgfbr3O88393 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.48■□□□□ 0.07
Tgfbr3O88393 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Tgfbr3O88393 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
Tgfbr3O88393 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Tgfbr3O88393 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Tgfbr3O88393 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Tgfbr3O88393 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tgfbr3O88393 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Tgfbr3O88393 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Tgfbr3O88393 CT943659.1-201ENSMUST00000215459 326 ntBASIC15.48■□□□□ 0.07
Tgfbr3O88393 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
Tgfbr3O88393 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tgfbr3O88393 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.48■□□□□ 0.07
Tgfbr3O88393 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Tgfbr3O88393 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tgfbr3O88393 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tgfbr3O88393 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.47■□□□□ 0.07
Tgfbr3O88393 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tgfbr3O88393 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tgfbr3O88393 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tgfbr3O88393 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Tgfbr3O88393 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tgfbr3O88393 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.47■□□□□ 0.07
Tgfbr3O88393 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
Tgfbr3O88393 Gm27628-201ENSMUST00000184911 107 ntBASIC15.47■□□□□ 0.07
Tgfbr3O88393 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.47■□□□□ 0.07
Tgfbr3O88393 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.47■□□□□ 0.07
Tgfbr3O88393 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Tgfbr3O88393 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.47■□□□□ 0.07
Tgfbr3O88393 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.47■□□□□ 0.07
Tgfbr3O88393 Gm8655-201ENSMUST00000221159 852 ntBASIC15.47■□□□□ 0.07
Tgfbr3O88393 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tgfbr3O88393 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tgfbr3O88393 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tgfbr3O88393 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tgfbr3O88393 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tgfbr3O88393 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tgfbr3O88393 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tgfbr3O88393 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Tgfbr3O88393 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tgfbr3O88393 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tgfbr3O88393 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tgfbr3O88393 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
Tgfbr3O88393 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tgfbr3O88393 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tgfbr3O88393 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Tgfbr3O88393 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Tgfbr3O88393 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tgfbr3O88393 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tgfbr3O88393 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Tgfbr3O88393 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tgfbr3O88393 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tgfbr3O88393 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tgfbr3O88393 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.46■□□□□ 0.07
Tgfbr3O88393 Gm13036-201ENSMUST00000117799 748 ntBASIC15.46■□□□□ 0.07
Tgfbr3O88393 Gm14494-201ENSMUST00000118786 435 ntBASIC15.46■□□□□ 0.07
Tgfbr3O88393 Gm14140-201ENSMUST00000119999 995 ntBASIC15.46■□□□□ 0.07
Tgfbr3O88393 Gm6736-201ENSMUST00000166583 948 ntBASIC15.46■□□□□ 0.07
Tgfbr3O88393 Gm43575-201ENSMUST00000196420 516 ntBASIC15.46■□□□□ 0.07
Tgfbr3O88393 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Tgfbr3O88393 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tgfbr3O88393 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tgfbr3O88393 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tgfbr3O88393 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tgfbr3O88393 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tgfbr3O88393 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Tgfbr3O88393 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
Tgfbr3O88393 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Tgfbr3O88393 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Tgfbr3O88393 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tgfbr3O88393 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms