Protein–RNA interactions for Protein: O88346

Tnnt1, Troponin T, slow skeletal muscle, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnnt1O88346 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Tnnt1O88346 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tnnt1O88346 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tnnt1O88346 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tnnt1O88346 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tnnt1O88346 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tnnt1O88346 Gm44454-201ENSMUST00000198541 138 ntBASIC20.82■□□□□ 0.92
Tnnt1O88346 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC20.82■□□□□ 0.92
Tnnt1O88346 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC20.82■□□□□ 0.92
Tnnt1O88346 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC20.82■□□□□ 0.92
Tnnt1O88346 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tnnt1O88346 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Tnnt1O88346 Gm36858-201ENSMUST00000194501 2391 ntBASIC20.82■□□□□ 0.92
Tnnt1O88346 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tnnt1O88346 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Tnnt1O88346 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Tnnt1O88346 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Tnnt1O88346 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Tnnt1O88346 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Tnnt1O88346 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Tnnt1O88346 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tnnt1O88346 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tnnt1O88346 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tnnt1O88346 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tnnt1O88346 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Tnnt1O88346 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tnnt1O88346 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tnnt1O88346 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tnnt1O88346 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Tnnt1O88346 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tnnt1O88346 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC20.81■□□□□ 0.92
Tnnt1O88346 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC20.81■□□□□ 0.92
Tnnt1O88346 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Tnnt1O88346 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC20.81■□□□□ 0.92
Tnnt1O88346 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Tnnt1O88346 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC20.81■□□□□ 0.92
Tnnt1O88346 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Tnnt1O88346 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tnnt1O88346 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tnnt1O88346 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Tnnt1O88346 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Tnnt1O88346 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnnt1O88346 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnnt1O88346 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnnt1O88346 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Tnnt1O88346 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Tnnt1O88346 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
Tnnt1O88346 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnnt1O88346 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnnt1O88346 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnnt1O88346 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Tnnt1O88346 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Tnnt1O88346 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Tnnt1O88346 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnnt1O88346 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnnt1O88346 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnnt1O88346 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnnt1O88346 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Tnnt1O88346 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnnt1O88346 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC20.8■□□□□ 0.92
Tnnt1O88346 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnnt1O88346 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC20.79■□□□□ 0.92
Tnnt1O88346 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tnnt1O88346 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Tnnt1O88346 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tnnt1O88346 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Tnnt1O88346 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Tnnt1O88346 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC20.79■□□□□ 0.92
Tnnt1O88346 Gm1818-201ENSMUST00000169406 1184 ntBASIC20.79■□□□□ 0.92
Tnnt1O88346 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tnnt1O88346 Gm16401-202ENSMUST00000197463 2074 ntBASIC20.79■□□□□ 0.92
Tnnt1O88346 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnnt1O88346 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnnt1O88346 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnnt1O88346 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Tnnt1O88346 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnnt1O88346 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnnt1O88346 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Tnnt1O88346 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnnt1O88346 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Tnnt1O88346 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Tnnt1O88346 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnnt1O88346 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Tnnt1O88346 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC20.78■□□□□ 0.92
Tnnt1O88346 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnnt1O88346 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC20.78■□□□□ 0.92
Tnnt1O88346 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
Tnnt1O88346 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnnt1O88346 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Tnnt1O88346 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnnt1O88346 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnnt1O88346 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Tnnt1O88346 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnnt1O88346 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnnt1O88346 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tnnt1O88346 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tnnt1O88346 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tnnt1O88346 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.77■□□□□ 0.92
Tnnt1O88346 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tnnt1O88346 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms