Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc4a4O88343 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC19.24■□□□□ 0.67
Slc4a4O88343 Gm15372-201ENSMUST00000120729 834 ntBASIC19.24■□□□□ 0.67
Slc4a4O88343 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC19.24■□□□□ 0.67
Slc4a4O88343 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC19.24■□□□□ 0.67
Slc4a4O88343 AC108846.1-201ENSMUST00000214531 513 ntBASIC19.24■□□□□ 0.67
Slc4a4O88343 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC19.24■□□□□ 0.67
Slc4a4O88343 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc4a4O88343 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Slc4a4O88343 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Slc4a4O88343 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc4a4O88343 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.24■□□□□ 0.67
Slc4a4O88343 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc4a4O88343 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc4a4O88343 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC19.24■□□□□ 0.67
Slc4a4O88343 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Slc4a4O88343 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC19.24■□□□□ 0.67
Slc4a4O88343 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.24■□□□□ 0.67
Slc4a4O88343 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc4a4O88343 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Slc4a4O88343 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Slc4a4O88343 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc4a4O88343 Gm7935-201ENSMUST00000100555 1278 ntBASIC19.23■□□□□ 0.67
Slc4a4O88343 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Slc4a4O88343 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc4a4O88343 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC19.23■□□□□ 0.67
Slc4a4O88343 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC19.23■□□□□ 0.67
Slc4a4O88343 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Slc4a4O88343 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc4a4O88343 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc4a4O88343 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc4a4O88343 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Slc4a4O88343 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.23■□□□□ 0.67
Slc4a4O88343 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc4a4O88343 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC19.23■□□□□ 0.67
Slc4a4O88343 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc4a4O88343 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc4a4O88343 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc4a4O88343 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Slc4a4O88343 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc4a4O88343 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc4a4O88343 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc4a4O88343 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc4a4O88343 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Slc4a4O88343 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc4a4O88343 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc4a4O88343 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc4a4O88343 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Slc4a4O88343 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc4a4O88343 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc4a4O88343 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc4a4O88343 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc4a4O88343 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc4a4O88343 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Slc4a4O88343 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc4a4O88343 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC19.22■□□□□ 0.67
Slc4a4O88343 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC19.22■□□□□ 0.67
Slc4a4O88343 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC19.22■□□□□ 0.67
Slc4a4O88343 Gm44454-201ENSMUST00000198541 138 ntBASIC19.22■□□□□ 0.67
Slc4a4O88343 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Slc4a4O88343 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC19.22■□□□□ 0.67
Slc4a4O88343 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC19.22■□□□□ 0.67
Slc4a4O88343 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc4a4O88343 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Slc4a4O88343 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Slc4a4O88343 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc4a4O88343 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc4a4O88343 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc4a4O88343 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Slc4a4O88343 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc4a4O88343 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc4a4O88343 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc4a4O88343 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc4a4O88343 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Slc4a4O88343 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc4a4O88343 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc4a4O88343 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Slc4a4O88343 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc4a4O88343 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC19.21■□□□□ 0.67
Slc4a4O88343 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC19.21■□□□□ 0.67
Slc4a4O88343 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc4a4O88343 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc4a4O88343 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Slc4a4O88343 Gm27867-201ENSMUST00000184778 125 ntBASIC19.21■□□□□ 0.67
Slc4a4O88343 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc4a4O88343 Birc2-201ENSMUST00000054878 378 ntBASIC19.21■□□□□ 0.67
Slc4a4O88343 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Slc4a4O88343 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Slc4a4O88343 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc4a4O88343 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Slc4a4O88343 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc4a4O88343 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc4a4O88343 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Slc4a4O88343 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
Slc4a4O88343 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Slc4a4O88343 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc4a4O88343 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc4a4O88343 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc4a4O88343 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc4a4O88343 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms