Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Pdlim1O70400 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pdlim1O70400 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pdlim1O70400 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Pdlim1O70400 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pdlim1O70400 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pdlim1O70400 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pdlim1O70400 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pdlim1O70400 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.11■□□□□ 0.17
Pdlim1O70400 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pdlim1O70400 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pdlim1O70400 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pdlim1O70400 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pdlim1O70400 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pdlim1O70400 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Pdlim1O70400 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pdlim1O70400 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pdlim1O70400 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Pdlim1O70400 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.1■□□□□ 0.17
Pdlim1O70400 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pdlim1O70400 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pdlim1O70400 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pdlim1O70400 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.1■□□□□ 0.17
Pdlim1O70400 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Pdlim1O70400 Olfr129-201ENSMUST00000122318 993 ntBASIC16.1■□□□□ 0.17
Pdlim1O70400 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pdlim1O70400 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pdlim1O70400 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pdlim1O70400 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.1■□□□□ 0.17
Pdlim1O70400 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Pdlim1O70400 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pdlim1O70400 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pdlim1O70400 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pdlim1O70400 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pdlim1O70400 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.1■□□□□ 0.17
Pdlim1O70400 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pdlim1O70400 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pdlim1O70400 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pdlim1O70400 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pdlim1O70400 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pdlim1O70400 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.09■□□□□ 0.17
Pdlim1O70400 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Pdlim1O70400 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pdlim1O70400 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pdlim1O70400 Gm13312-201ENSMUST00000119631 718 ntBASIC16.09■□□□□ 0.17
Pdlim1O70400 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.09■□□□□ 0.17
Pdlim1O70400 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Pdlim1O70400 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
Pdlim1O70400 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.09■□□□□ 0.17
Pdlim1O70400 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.09■□□□□ 0.17
Pdlim1O70400 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pdlim1O70400 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pdlim1O70400 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pdlim1O70400 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pdlim1O70400 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pdlim1O70400 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pdlim1O70400 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pdlim1O70400 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.09■□□□□ 0.17
Pdlim1O70400 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Pdlim1O70400 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pdlim1O70400 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pdlim1O70400 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pdlim1O70400 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pdlim1O70400 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pdlim1O70400 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pdlim1O70400 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pdlim1O70400 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pdlim1O70400 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pdlim1O70400 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.08■□□□□ 0.16
Pdlim1O70400 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.08■□□□□ 0.16
Pdlim1O70400 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pdlim1O70400 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Pdlim1O70400 Gm27357-201ENSMUST00000183754 135 ntBASIC16.08■□□□□ 0.16
Pdlim1O70400 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.08■□□□□ 0.16
Pdlim1O70400 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pdlim1O70400 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pdlim1O70400 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pdlim1O70400 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pdlim1O70400 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pdlim1O70400 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pdlim1O70400 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Pdlim1O70400 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pdlim1O70400 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pdlim1O70400 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pdlim1O70400 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pdlim1O70400 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Pdlim1O70400 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pdlim1O70400 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pdlim1O70400 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pdlim1O70400 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pdlim1O70400 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pdlim1O70400 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Pdlim1O70400 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.07■□□□□ 0.16
Pdlim1O70400 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pdlim1O70400 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pdlim1O70400 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pdlim1O70400 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.07■□□□□ 0.16
Pdlim1O70400 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pdlim1O70400 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pdlim1O70400 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms