Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpl35aO55142 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpl35aO55142 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpl35aO55142 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Rpl35aO55142 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpl35aO55142 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Rpl35aO55142 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpl35aO55142 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.18□□□□□ -0.46
Rpl35aO55142 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rpl35aO55142 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Rpl35aO55142 Gm18115-201ENSMUST00000221209 621 ntBASIC12.18□□□□□ -0.46
Rpl35aO55142 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpl35aO55142 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpl35aO55142 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Rpl35aO55142 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Rpl35aO55142 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.18□□□□□ -0.46
Rpl35aO55142 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpl35aO55142 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Rpl35aO55142 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rpl35aO55142 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Rpl35aO55142 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpl35aO55142 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rpl35aO55142 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpl35aO55142 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpl35aO55142 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl35aO55142 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl35aO55142 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl35aO55142 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl35aO55142 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl35aO55142 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl35aO55142 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl35aO55142 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl35aO55142 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl35aO55142 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Rpl35aO55142 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl35aO55142 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl35aO55142 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.17□□□□□ -0.46
Rpl35aO55142 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl35aO55142 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl35aO55142 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.17□□□□□ -0.46
Rpl35aO55142 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.17□□□□□ -0.46
Rpl35aO55142 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl35aO55142 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl35aO55142 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl35aO55142 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl35aO55142 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl35aO55142 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Rpl35aO55142 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl35aO55142 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl35aO55142 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Rpl35aO55142 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Rpl35aO55142 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl35aO55142 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl35aO55142 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl35aO55142 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC12.17□□□□□ -0.46
Rpl35aO55142 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl35aO55142 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl35aO55142 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl35aO55142 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.17□□□□□ -0.46
Rpl35aO55142 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl35aO55142 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl35aO55142 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl35aO55142 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl35aO55142 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl35aO55142 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl35aO55142 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl35aO55142 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl35aO55142 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl35aO55142 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl35aO55142 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl35aO55142 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC12.16□□□□□ -0.46
Rpl35aO55142 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl35aO55142 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC12.16□□□□□ -0.46
Rpl35aO55142 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl35aO55142 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Rpl35aO55142 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl35aO55142 Gm18421-201ENSMUST00000204122 625 ntBASIC12.16□□□□□ -0.46
Rpl35aO55142 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Rpl35aO55142 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.16□□□□□ -0.46
Rpl35aO55142 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl35aO55142 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl35aO55142 Gm10819-201ENSMUST00000099988 561 ntBASIC12.16□□□□□ -0.46
Rpl35aO55142 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl35aO55142 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl35aO55142 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl35aO55142 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl35aO55142 Gm11620-201ENSMUST00000118770 1845 ntBASIC12.16□□□□□ -0.46
Rpl35aO55142 Gm19439-201ENSMUST00000198195 2273 ntBASIC12.16□□□□□ -0.46
Rpl35aO55142 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl35aO55142 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl35aO55142 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl35aO55142 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl35aO55142 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC12.15□□□□□ -0.46
Rpl35aO55142 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl35aO55142 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl35aO55142 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC12.15□□□□□ -0.46
Rpl35aO55142 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl35aO55142 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl35aO55142 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl35aO55142 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms