Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6dO55057 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6dO55057 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pde6dO55057 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pde6dO55057 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.93□□□□□ -0.34
Pde6dO55057 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pde6dO55057 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pde6dO55057 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pde6dO55057 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pde6dO55057 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pde6dO55057 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Pde6dO55057 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pde6dO55057 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pde6dO55057 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pde6dO55057 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pde6dO55057 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC12.93□□□□□ -0.34
Pde6dO55057 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pde6dO55057 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pde6dO55057 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC12.93□□□□□ -0.34
Pde6dO55057 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Pde6dO55057 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pde6dO55057 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pde6dO55057 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pde6dO55057 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pde6dO55057 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pde6dO55057 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pde6dO55057 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pde6dO55057 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.93□□□□□ -0.34
Pde6dO55057 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pde6dO55057 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pde6dO55057 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pde6dO55057 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pde6dO55057 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Pde6dO55057 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pde6dO55057 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC12.92□□□□□ -0.34
Pde6dO55057 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pde6dO55057 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pde6dO55057 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Pde6dO55057 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Pde6dO55057 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pde6dO55057 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pde6dO55057 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC12.92□□□□□ -0.34
Pde6dO55057 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pde6dO55057 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pde6dO55057 Gm27454-201ENSMUST00000185090 204 ntBASIC12.92□□□□□ -0.34
Pde6dO55057 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pde6dO55057 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pde6dO55057 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pde6dO55057 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pde6dO55057 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pde6dO55057 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Pde6dO55057 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pde6dO55057 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pde6dO55057 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Pde6dO55057 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pde6dO55057 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Pde6dO55057 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pde6dO55057 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pde6dO55057 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Pde6dO55057 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pde6dO55057 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pde6dO55057 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pde6dO55057 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Pde6dO55057 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pde6dO55057 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pde6dO55057 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pde6dO55057 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pde6dO55057 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.91□□□□□ -0.34
Pde6dO55057 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.91□□□□□ -0.34
Pde6dO55057 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pde6dO55057 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pde6dO55057 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pde6dO55057 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Pde6dO55057 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC12.91□□□□□ -0.34
Pde6dO55057 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC12.91□□□□□ -0.34
Pde6dO55057 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pde6dO55057 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pde6dO55057 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pde6dO55057 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pde6dO55057 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.91□□□□□ -0.34
Pde6dO55057 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pde6dO55057 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pde6dO55057 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pde6dO55057 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Pde6dO55057 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pde6dO55057 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pde6dO55057 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pde6dO55057 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC12.91□□□□□ -0.34
Pde6dO55057 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pde6dO55057 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pde6dO55057 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pde6dO55057 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pde6dO55057 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pde6dO55057 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pde6dO55057 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Pde6dO55057 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pde6dO55057 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC12.9□□□□□ -0.34
Pde6dO55057 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pde6dO55057 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pde6dO55057 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms