Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SncaO55042 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SncaO55042 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
SncaO55042 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.53□□□□□ -0.24
SncaO55042 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SncaO55042 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
SncaO55042 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13.53□□□□□ -0.24
SncaO55042 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SncaO55042 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SncaO55042 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SncaO55042 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
SncaO55042 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SncaO55042 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SncaO55042 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SncaO55042 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SncaO55042 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SncaO55042 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SncaO55042 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SncaO55042 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.53□□□□□ -0.24
SncaO55042 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SncaO55042 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
SncaO55042 Timm23-208ENSMUST00000226683 750 ntBASIC13.53□□□□□ -0.24
SncaO55042 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
SncaO55042 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SncaO55042 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
SncaO55042 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
SncaO55042 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SncaO55042 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SncaO55042 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SncaO55042 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SncaO55042 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SncaO55042 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SncaO55042 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SncaO55042 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SncaO55042 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SncaO55042 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SncaO55042 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SncaO55042 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SncaO55042 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SncaO55042 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SncaO55042 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.52□□□□□ -0.24
SncaO55042 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SncaO55042 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
SncaO55042 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
SncaO55042 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
SncaO55042 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SncaO55042 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SncaO55042 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SncaO55042 Mir1199-201ENSMUST00000117015 119 ntBASIC13.52□□□□□ -0.25
SncaO55042 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
SncaO55042 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC13.52□□□□□ -0.25
SncaO55042 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SncaO55042 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SncaO55042 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SncaO55042 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SncaO55042 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SncaO55042 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
SncaO55042 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SncaO55042 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SncaO55042 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SncaO55042 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
SncaO55042 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SncaO55042 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SncaO55042 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SncaO55042 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SncaO55042 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
SncaO55042 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SncaO55042 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.52□□□□□ -0.25
SncaO55042 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
SncaO55042 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
SncaO55042 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
SncaO55042 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SncaO55042 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SncaO55042 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SncaO55042 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SncaO55042 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
SncaO55042 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SncaO55042 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SncaO55042 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.51□□□□□ -0.25
SncaO55042 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.51□□□□□ -0.25
SncaO55042 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SncaO55042 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SncaO55042 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
SncaO55042 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SncaO55042 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SncaO55042 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SncaO55042 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SncaO55042 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SncaO55042 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC13.51□□□□□ -0.25
SncaO55042 AC156016.1-201ENSMUST00000227190 1035 ntBASIC13.51□□□□□ -0.25
SncaO55042 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SncaO55042 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
SncaO55042 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SncaO55042 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SncaO55042 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SncaO55042 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SncaO55042 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SncaO55042 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SncaO55042 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SncaO55042 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms