Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Cxcl13O55038 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.79□□□□□ -0.2
Cxcl13O55038 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl13O55038 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl13O55038 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl13O55038 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cxcl13O55038 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Cxcl13O55038 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cxcl13O55038 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl13O55038 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Cxcl13O55038 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl13O55038 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cxcl13O55038 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.78□□□□□ -0.2
Cxcl13O55038 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl13O55038 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl13O55038 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl13O55038 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.78□□□□□ -0.2
Cxcl13O55038 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl13O55038 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cxcl13O55038 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.78□□□□□ -0.2
Cxcl13O55038 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
Cxcl13O55038 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl13O55038 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl13O55038 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl13O55038 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl13O55038 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.78□□□□□ -0.2
Cxcl13O55038 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl13O55038 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.78□□□□□ -0.2
Cxcl13O55038 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cxcl13O55038 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl13O55038 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cxcl13O55038 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl13O55038 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.78□□□□□ -0.2
Cxcl13O55038 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl13O55038 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cxcl13O55038 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl13O55038 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl13O55038 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl13O55038 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl13O55038 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Cxcl13O55038 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cxcl13O55038 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cxcl13O55038 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Cxcl13O55038 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cxcl13O55038 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cxcl13O55038 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.77□□□□□ -0.21
Cxcl13O55038 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
Cxcl13O55038 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cxcl13O55038 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13.77□□□□□ -0.21
Cxcl13O55038 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.77□□□□□ -0.21
Cxcl13O55038 Gm6376-201ENSMUST00000209407 580 ntBASIC13.77□□□□□ -0.21
Cxcl13O55038 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cxcl13O55038 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cxcl13O55038 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cxcl13O55038 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cxcl13O55038 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cxcl13O55038 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Cxcl13O55038 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cxcl13O55038 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cxcl13O55038 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Cxcl13O55038 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Cxcl13O55038 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cxcl13O55038 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cxcl13O55038 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cxcl13O55038 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cxcl13O55038 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cxcl13O55038 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cxcl13O55038 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC13.76□□□□□ -0.21
Cxcl13O55038 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cxcl13O55038 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Cxcl13O55038 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cxcl13O55038 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.76□□□□□ -0.21
Cxcl13O55038 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.76□□□□□ -0.21
Cxcl13O55038 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Cxcl13O55038 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Cxcl13O55038 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cxcl13O55038 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Cxcl13O55038 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cxcl13O55038 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cxcl13O55038 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cxcl13O55038 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cxcl13O55038 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cxcl13O55038 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC13.75□□□□□ -0.21
Cxcl13O55038 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cxcl13O55038 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Cxcl13O55038 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.75□□□□□ -0.21
Cxcl13O55038 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cxcl13O55038 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cxcl13O55038 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.75□□□□□ -0.21
Cxcl13O55038 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cxcl13O55038 Gm44357-201ENSMUST00000195897 142 ntBASIC13.75□□□□□ -0.21
Cxcl13O55038 Gm19658-201ENSMUST00000196231 138 ntBASIC13.75□□□□□ -0.21
Cxcl13O55038 Gm44367-201ENSMUST00000196836 138 ntBASIC13.75□□□□□ -0.21
Cxcl13O55038 Gm44350-201ENSMUST00000197197 138 ntBASIC13.75□□□□□ -0.21
Cxcl13O55038 Gm44390-201ENSMUST00000197533 144 ntBASIC13.75□□□□□ -0.21
Cxcl13O55038 Gm44313-201ENSMUST00000198018 138 ntBASIC13.75□□□□□ -0.21
Cxcl13O55038 Gm44486-201ENSMUST00000198508 138 ntBASIC13.75□□□□□ -0.21
Cxcl13O55038 Gm44314-201ENSMUST00000199263 138 ntBASIC13.75□□□□□ -0.21
Cxcl13O55038 Gm44394-201ENSMUST00000199558 138 ntBASIC13.75□□□□□ -0.21
Cxcl13O55038 Gm44484-201ENSMUST00000199873 138 ntBASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms