Protein–RNA interactions for Protein: O55029

Copb2, Coatomer subunit beta', mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2O55029 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Copb2O55029 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Copb2O55029 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Copb2O55029 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Copb2O55029 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Copb2O55029 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Copb2O55029 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Copb2O55029 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Copb2O55029 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Copb2O55029 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Copb2O55029 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Copb2O55029 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Copb2O55029 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Copb2O55029 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Copb2O55029 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Copb2O55029 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
Copb2O55029 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.71■□□□□ 0.59
Copb2O55029 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.71■□□□□ 0.59
Copb2O55029 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Copb2O55029 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Copb2O55029 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Copb2O55029 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Copb2O55029 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Copb2O55029 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Copb2O55029 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Copb2O55029 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Copb2O55029 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Copb2O55029 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Copb2O55029 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.7■□□□□ 0.58
Copb2O55029 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Copb2O55029 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Copb2O55029 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC18.7■□□□□ 0.58
Copb2O55029 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.7■□□□□ 0.58
Copb2O55029 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Copb2O55029 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Copb2O55029 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Copb2O55029 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Copb2O55029 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Copb2O55029 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Copb2O55029 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.7■□□□□ 0.58
Copb2O55029 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Copb2O55029 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.7■□□□□ 0.58
Copb2O55029 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Copb2O55029 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Copb2O55029 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Copb2O55029 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Copb2O55029 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Copb2O55029 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Copb2O55029 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Copb2O55029 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.69■□□□□ 0.58
Copb2O55029 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Copb2O55029 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Copb2O55029 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Copb2O55029 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Copb2O55029 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Copb2O55029 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Copb2O55029 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Copb2O55029 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Copb2O55029 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Copb2O55029 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Copb2O55029 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Copb2O55029 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Copb2O55029 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Copb2O55029 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Copb2O55029 Gm25745-201ENSMUST00000174945 133 ntBASIC18.69■□□□□ 0.58
Copb2O55029 Gm44357-201ENSMUST00000195897 142 ntBASIC18.69■□□□□ 0.58
Copb2O55029 Gm19658-201ENSMUST00000196231 138 ntBASIC18.69■□□□□ 0.58
Copb2O55029 Gm44367-201ENSMUST00000196836 138 ntBASIC18.69■□□□□ 0.58
Copb2O55029 Gm44350-201ENSMUST00000197197 138 ntBASIC18.69■□□□□ 0.58
Copb2O55029 Gm44390-201ENSMUST00000197533 144 ntBASIC18.69■□□□□ 0.58
Copb2O55029 Gm44313-201ENSMUST00000198018 138 ntBASIC18.69■□□□□ 0.58
Copb2O55029 Gm44486-201ENSMUST00000198508 138 ntBASIC18.69■□□□□ 0.58
Copb2O55029 Gm44314-201ENSMUST00000199263 138 ntBASIC18.69■□□□□ 0.58
Copb2O55029 Gm44394-201ENSMUST00000199558 138 ntBASIC18.69■□□□□ 0.58
Copb2O55029 Gm44484-201ENSMUST00000199873 138 ntBASIC18.69■□□□□ 0.58
Copb2O55029 Gm44466-201ENSMUST00000200264 138 ntBASIC18.69■□□□□ 0.58
Copb2O55029 Gm44359-201ENSMUST00000200671 138 ntBASIC18.69■□□□□ 0.58
Copb2O55029 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Copb2O55029 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Copb2O55029 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Copb2O55029 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Copb2O55029 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Copb2O55029 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Copb2O55029 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Copb2O55029 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Copb2O55029 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Copb2O55029 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Copb2O55029 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.68■□□□□ 0.58
Copb2O55029 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Copb2O55029 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Copb2O55029 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Copb2O55029 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Copb2O55029 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Copb2O55029 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Copb2O55029 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Copb2O55029 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Copb2O55029 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
Copb2O55029 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
Copb2O55029 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Copb2O55029 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms