Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prom1O54990 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Prom1O54990 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.96■□□□□ 0.47
Prom1O54990 Gm12497-201ENSMUST00000138778 237 ntBASIC17.96■□□□□ 0.47
Prom1O54990 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.96■□□□□ 0.47
Prom1O54990 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
Prom1O54990 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.96■□□□□ 0.47
Prom1O54990 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Prom1O54990 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prom1O54990 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.96■□□□□ 0.47
Prom1O54990 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Prom1O54990 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prom1O54990 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Prom1O54990 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prom1O54990 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prom1O54990 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Prom1O54990 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prom1O54990 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prom1O54990 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prom1O54990 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.95■□□□□ 0.46
Prom1O54990 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prom1O54990 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prom1O54990 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.95■□□□□ 0.46
Prom1O54990 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Prom1O54990 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prom1O54990 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.95■□□□□ 0.46
Prom1O54990 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Prom1O54990 Gm15467-201ENSMUST00000120582 445 ntBASIC17.95■□□□□ 0.46
Prom1O54990 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.95■□□□□ 0.46
Prom1O54990 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Prom1O54990 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.95■□□□□ 0.46
Prom1O54990 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Prom1O54990 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Prom1O54990 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prom1O54990 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Prom1O54990 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
Prom1O54990 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prom1O54990 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Prom1O54990 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prom1O54990 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Prom1O54990 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Prom1O54990 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prom1O54990 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prom1O54990 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
Prom1O54990 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Prom1O54990 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prom1O54990 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prom1O54990 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prom1O54990 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prom1O54990 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prom1O54990 Gm13036-201ENSMUST00000117799 748 ntBASIC17.94■□□□□ 0.46
Prom1O54990 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.94■□□□□ 0.46
Prom1O54990 Gm25406-201ENSMUST00000157599 105 ntBASIC17.94■□□□□ 0.46
Prom1O54990 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
Prom1O54990 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.94■□□□□ 0.46
Prom1O54990 AV026068-213ENSMUST00000223675 1171 ntBASIC17.94■□□□□ 0.46
Prom1O54990 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prom1O54990 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prom1O54990 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Prom1O54990 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prom1O54990 Gm37500-201ENSMUST00000192059 1443 ntBASIC17.94■□□□□ 0.46
Prom1O54990 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prom1O54990 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prom1O54990 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Prom1O54990 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.94■□□□□ 0.46
Prom1O54990 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Prom1O54990 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prom1O54990 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prom1O54990 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
Prom1O54990 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prom1O54990 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prom1O54990 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Prom1O54990 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.93■□□□□ 0.46
Prom1O54990 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prom1O54990 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prom1O54990 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.93■□□□□ 0.46
Prom1O54990 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prom1O54990 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prom1O54990 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prom1O54990 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Prom1O54990 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prom1O54990 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Prom1O54990 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.93■□□□□ 0.46
Prom1O54990 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prom1O54990 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prom1O54990 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prom1O54990 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prom1O54990 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prom1O54990 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Prom1O54990 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Prom1O54990 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Prom1O54990 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Prom1O54990 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Prom1O54990 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prom1O54990 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.92■□□□□ 0.46
Prom1O54990 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prom1O54990 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prom1O54990 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prom1O54990 Gm14494-201ENSMUST00000118786 435 ntBASIC17.92■□□□□ 0.46
Prom1O54990 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms