Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf13O54965 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf13O54965 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf13O54965 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf13O54965 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.84□□□□□ -0.03
Rnf13O54965 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.84□□□□□ -0.03
Rnf13O54965 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf13O54965 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf13O54965 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf13O54965 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf13O54965 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf13O54965 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf13O54965 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf13O54965 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.83□□□□□ -0.03
Rnf13O54965 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rnf13O54965 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rnf13O54965 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Rnf13O54965 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rnf13O54965 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rnf13O54965 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Rnf13O54965 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
Rnf13O54965 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf13O54965 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf13O54965 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf13O54965 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Rnf13O54965 Gm38027-201ENSMUST00000192315 235 ntBASIC14.83□□□□□ -0.04
Rnf13O54965 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.83□□□□□ -0.04
Rnf13O54965 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC14.83□□□□□ -0.04
Rnf13O54965 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf13O54965 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf13O54965 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf13O54965 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf13O54965 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf13O54965 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf13O54965 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf13O54965 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf13O54965 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf13O54965 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf13O54965 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf13O54965 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf13O54965 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf13O54965 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf13O54965 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf13O54965 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.83□□□□□ -0.04
Rnf13O54965 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf13O54965 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf13O54965 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf13O54965 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf13O54965 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.82□□□□□ -0.04
Rnf13O54965 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf13O54965 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf13O54965 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf13O54965 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf13O54965 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf13O54965 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf13O54965 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Rnf13O54965 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Rnf13O54965 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Rnf13O54965 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Rnf13O54965 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Rnf13O54965 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Rnf13O54965 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf13O54965 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Rnf13O54965 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
Rnf13O54965 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf13O54965 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Rnf13O54965 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf13O54965 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf13O54965 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf13O54965 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf13O54965 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf13O54965 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf13O54965 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Rnf13O54965 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf13O54965 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf13O54965 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf13O54965 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf13O54965 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf13O54965 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.81□□□□□ -0.04
Rnf13O54965 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Rnf13O54965 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf13O54965 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf13O54965 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf13O54965 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.81□□□□□ -0.04
Rnf13O54965 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf13O54965 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf13O54965 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Rnf13O54965 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf13O54965 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf13O54965 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf13O54965 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Rnf13O54965 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf13O54965 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Rnf13O54965 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf13O54965 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.8□□□□□ -0.04
Rnf13O54965 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.8□□□□□ -0.04
Rnf13O54965 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC14.8□□□□□ -0.04
Rnf13O54965 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf13O54965 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf13O54965 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms