Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Per2O54943 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Per2O54943 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Per2O54943 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Per2O54943 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Per2O54943 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Per2O54943 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Per2O54943 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Per2O54943 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Per2O54943 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Per2O54943 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Per2O54943 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Per2O54943 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Per2O54943 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Per2O54943 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Per2O54943 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Per2O54943 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Per2O54943 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Per2O54943 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Per2O54943 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.03■□□□□ 0.32
Per2O54943 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Per2O54943 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Per2O54943 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Per2O54943 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Per2O54943 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Per2O54943 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Per2O54943 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Per2O54943 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Per2O54943 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Per2O54943 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Per2O54943 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Per2O54943 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
Per2O54943 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Per2O54943 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Per2O54943 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Per2O54943 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Per2O54943 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Per2O54943 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Per2O54943 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Per2O54943 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Per2O54943 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Per2O54943 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.02■□□□□ 0.32
Per2O54943 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Per2O54943 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Per2O54943 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Per2O54943 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Per2O54943 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Per2O54943 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Per2O54943 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Per2O54943 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Per2O54943 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Per2O54943 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Per2O54943 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Per2O54943 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Per2O54943 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Per2O54943 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Per2O54943 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Per2O54943 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Per2O54943 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Per2O54943 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Per2O54943 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Per2O54943 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Per2O54943 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Per2O54943 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Per2O54943 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Per2O54943 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Per2O54943 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Per2O54943 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Per2O54943 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Per2O54943 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Per2O54943 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.01■□□□□ 0.31
Per2O54943 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Per2O54943 Gm18101-201ENSMUST00000215769 548 ntBASIC17.01■□□□□ 0.31
Per2O54943 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Per2O54943 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.01■□□□□ 0.31
Per2O54943 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Per2O54943 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Per2O54943 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Per2O54943 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.01■□□□□ 0.31
Per2O54943 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Per2O54943 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Per2O54943 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Per2O54943 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17■□□□□ 0.31
Per2O54943 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17■□□□□ 0.31
Per2O54943 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Per2O54943 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17■□□□□ 0.31
Per2O54943 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17■□□□□ 0.31
Per2O54943 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Per2O54943 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17■□□□□ 0.31
Per2O54943 Gm22697-201ENSMUST00000175194 63 ntBASIC17■□□□□ 0.31
Per2O54943 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17■□□□□ 0.31
Per2O54943 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
Per2O54943 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Per2O54943 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Per2O54943 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Per2O54943 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Per2O54943 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Per2O54943 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17■□□□□ 0.31
Per2O54943 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Per2O54943 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms